RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MARK4Q96L34 752 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 C5orf34Q96MH7 638 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 CEP41Q9BYV8 373 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 TEX13CA0A0J9YWL9 993 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 C5orf51A6NDU8 294 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 DNAAF5Q86Y56 855 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 PGAM4Q8N0Y7 254 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 GPATCH1Q9BRR8 931 aaKnown RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 CNTRLQ7Z7A1 2325 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 CLDN4O14493 209 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 KERAO60938 352 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 GNPDA1P46926 289 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 SLC12A3P55017 1021 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 PLEKHG4Q58EX7 1191 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 C1orf216Q8TAB5 229 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 ZNF180Q9UJW8 692 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 TLL2Q9Y6L7 1015 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 C22orf31O95567 290 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 C9orf64Q5T6V5 341 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 SAMD14Q8IZD0 417 aaPredicted RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 IPCEF1Q8WWN9 437 aaPredicted RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 THRSPQ92748 146 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 CENPNQ96H22 339 aaPredicted RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 TNFRSF11BO00300 401 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 PER2O15055 1255 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 DCLK1O15075 740 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 BPNT1O95861 308 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 KCNJ2P63252 427 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 SEZ6Q53EL9 994 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 MPP5Q8N3R9 675 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
TPR-201ENST00000367478 RHOJQ9H4E5 214 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 MYH1P12882 1939 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 MYH2Q9UKX2 1941 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
TPR-201ENST00000367478 SSR2P43308 183 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 APLP1P51693 650 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 GRIK4Q16099 956 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 PHYKPLQ8IUZ5 450 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 ADAM32Q8TC27 787 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 M0R036 132 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 ERAL1O75616 437 aaKnown RBP12.36□□□□□ -0.43
TPR-201ENST00000367478 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 C16orf46Q6P387 395 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 RGL4Q8IZJ4 473 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 LINGO1Q96FE5 620 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CD320Q9NPF0 282 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 RDH8Q9NYR8 311 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 LIASO43766 372 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 PRKD3O94806 890 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 UBXN7O94888 489 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 FGF19O95750 216 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CD247P20963 164 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CRHR1P34998 444 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 OAZ1P54368 228 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 FBXO43Q4G163 708 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 LHFPL3Q86UP9 236 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPR-201ENST00000367478 LRTM1Q9HBL6 345 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 ABI3Q9P2A4 366 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 GPSM3Q9Y4H4 160 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 LINC00032P0C843 101 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 MAPK14Q16539 360 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 GPR135Q8IZ08 494 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 THAP6Q8TBB0 222 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
TPR-201ENST00000367478 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 PSKH1P11801 424 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 ECT2LQ008S8 904 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 NUP54Q7Z3B4 507 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 FKBP7Q9Y680 259 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 SLC22A2O15244 555 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 TSPAN3O60637 253 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 KDM4BO94953 1096 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 MSR1P21757 451 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CXCR3P49682 368 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 PFKPQ01813 784 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CCNYL2Q5T2Q4 361 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 FIP1L1Q6UN15 594 aaKnown RBP12.36□□□□□ -0.43
TPR-201ENST00000367478 DNASE1L2Q92874 299 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 ZNF285Q96NJ3 590 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 ATG13O75143 517 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 TM7SF2O76062 418 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 EPCAMP16422 314 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 C1orf186Q6ZWK4 172 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 UBE2Q1Q7Z7E8 422 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 EHD4Q9H223 541 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 CPS1P31327 1500 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 H0Y858 1186 aa12.36□□□□□ -0.43
TPR-201ENST00000367478 H7C2Y5 167 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms