RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 BNIPLQ7Z465 357 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 TUBA1CQ9BQE3 449 aa11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 C12orf65Q9H3J6 166 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-202ENST00000366764 PNLIPRP1P54315 467 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 CLCQ05315 142 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 CACNG1Q06432 222 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 TEAD4Q15561 434 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SHROOM1Q2M3G4 852 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC10A6Q3KNW5 377 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SPPL2CQ8IUH8 684 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZFP42Q96MM3 310 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 COQ7Q99807 217 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PSME2Q9UL46 239 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 COQ6Q9Y2Z9 468 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 POLR3HQ9Y535 204 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 A0A088AWK7 358 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PAPSS2O95340 614 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZNF10P21506 573 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PSMA1P25786 263 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC16A1P53985 500 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 QPRTQ15274 297 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 AP5B1Q2VPB7 878 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PERM1Q5SV97 790 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 FRMD7Q6ZUT3 714 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 EPHX4Q8IUS5 362 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 BTRCQ9Y297 605 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 IRF6O14896 467 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ATP4BP51164 291 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SCNN1GP51170 649 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MPP2Q14168 576 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 HSDL1Q3SXM5 330 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 DGKKQ5KSL6 1271 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 YAF2Q8IY57 180 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 CRYBG2Q8N1P7 616 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MARVELD2Q8N4S9 558 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SSR3Q9UNL2 185 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 IPPQ9Y573 584 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ARID1AO14497 2285 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 E9PAM4 449 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 LOC110117498-PIK3R3F6TDL0 507 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 RIPPLY1Q0D2K3 151 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC30A8Q8IWU4 369 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 DQX1Q8TE96 717 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PIK3R3Q92569 461 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 COQ10BQ9H8M1 238 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 POLE3Q9NRF9 147 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MANSC4A6NHS7 340 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 NTSP30990 170 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ACLYP53396 1101 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 KLHL17Q6TDP4 642 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 KBTBD2Q8IY47 623 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 RASSF5Q8WWW0 418 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 CRYGNQ8WXF5 182 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MAGEH1Q9H213 219 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ING3Q9NXR8 418 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 STOML2Q9UJZ1 356 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 HES2Q9Y543 173 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MIA3Q5JRA6 1907 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 GPR25O00155 361 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 HAT1O14929 419 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 DENRO43583 198 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ZBTB11O95625 1053 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 IL18R1Q13478 541 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 UBASH3BQ8TF42 649 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 LRTOMTQ8WZ04 291 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 TSEN34Q9BSV6 310 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 A0A1W2PQ67 120 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PTGER3P43115 390 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 BTAF1O14981 1849 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MMP3P08254 477 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 CDH1P12830 882 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 SLC1A2P43004 574 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 UGT2B15P54855 530 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 HUNKP57058 714 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 IL10RBQ08334 325 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MERTKQ12866 999 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 DLG2Q15700 870 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MFSD1Q9H3U5 465 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 FER1L6Q2WGJ9 1857 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 NR2F6P10588 404 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 MSX2P35548 267 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 RPS7P62081 194 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 TRIM32Q13049 653 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 TP53INP1Q96A56 240 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 PHF11Q9UIL8 331 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 ENTPD4Q9Y227 616 aa11.73□□□□□ -0.53
CDC42BPA-202ENST00000366764 NADK2Q4G0N4 442 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 HID1Q8IV36 788 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 DNAJB9Q9UBS3 223 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 COL22A1Q8NFW1 1626 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 XRCC1P18887 633 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 FKBP1BP68106 108 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 MYBPC3Q14896 1274 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 ERMP1Q7Z2K6 904 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 SPPL2BQ8TCT7 592 aa11.72□□□□□ -0.53
CDC42BPA-202ENST00000366764 HASPINQ8TF76 798 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms