RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DET1Q7L5Y6 550 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ERMP1Q7Z2K6 904 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PRICKLE1Q96MT3 831 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 TRIM39Q9HCM9 518 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 TRMT13Q9NUP7 481 aaKnown RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 N4BP2Q86UW6 1770 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 IQCF5A8MTL0 148 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 JUNP05412 331 aaKnown RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 CKMP06732 381 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 MBL2P11226 248 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 COX7A2P14406 83 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 EPB42P16452 691 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SULT2A1Q06520 285 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 LAPTM4AQ15012 233 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 FGD3Q5JSP0 725 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-201ENST00000361866 TRNP1Q6NT89 227 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 UGT2A3Q6UWM9 527 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 FAM151BQ6UXP7 276 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ZNF605Q86T29 641 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 RASAL3Q86YV0 1011 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 TRPV3Q8NET8 790 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 KLHL32Q96NJ5 620 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PANX1Q96RD7 426 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 SLC25A51Q9H1U9 297 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 PLK2Q9NYY3 685 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 ST14Q9Y5Y6 855 aa13.82□□□□□ -0.2
COL6A1-201ENST00000361866 RFXANKO14593 260 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 CD52P31358 61 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 AIF1P55008 147 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 ACSM2AQ08AH3 577 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 NIPAL4Q0D2K0 466 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 PIGGQ5H8A4 983 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 ACSM2BQ68CK6 577 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 OSTM1Q86WC4 334 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 GTF3C2Q8WUA4 911 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 PPP3R2Q96LZ3 170 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 ZBED2Q9BTP6 218 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 MKS1Q9NXB0 559 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 TNPO3Q9Y5L0 923 aaKnown RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 GON4LQ3T8J9 2241 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 COL14A1Q05707 1796 aaKnown RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 EFCAB10A6NFE3 127 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 BCKDKO14874 412 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 TBX18O95935 607 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 PKMP14618 531 aaKnown RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 IMPDH1P20839 514 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 ATP6V0D1P61421 351 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 MYBPC1Q00872 1141 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 TRAP1Q12931 704 aaKnown RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 FAM174BQ3ZCQ3 159 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 PROSER1Q86XN7 944 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 SPPL2BQ8TCT7 592 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 MCOLN3Q8TDD5 553 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 KRT84Q9NSB2 600 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 IKZF3Q9UKT9 509 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 H0Y858 1186 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 NBNO60934 754 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 EPN2O95208 641 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 LPOP22079 712 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-201ENST00000361866 ELK4P28324 431 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 CPOXP36551 454 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 IQSEC1Q6DN90 963 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 SLC2A7Q6PXP3 512 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 GPR180Q86V85 440 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 GLT1D1Q96MS3 346 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 DEPDC7Q96QD5 511 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 SLC9A7Q96T83 725 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 NPY6RQ99463 290 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 HIPK3Q9H422 1215 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 IPPKQ9H8X2 491 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 DERAQ9Y315 318 aa13.81□□□□□ -0.2
COL6A1-201ENST00000361866 PNMA8CA0A1B0GUJ8 204 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 CCDC162PA2VCL2 907 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 AQP12BA6NM10 295 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 hCG_2039718K7EN88 272 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 TLR5O60602 858 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 FGF1P05230 155 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 IGFBP5P24593 272 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 TTPAP49638 278 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 NDST2P52849 883 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 UFM1P61960 85 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 STARD3Q14849 445 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 DENND1CQ8IV53 801 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 AQP12AQ8IXF9 295 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 SIX5Q8N196 739 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 OR7D4Q8NG98 312 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 MZB1Q8WU39 189 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
COL6A1-201ENST00000361866 TMCC3Q9ULS5 477 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms