RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PATJQ8NI35 1801 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 H2AFYO75367 372 aaKnown RBP16.1■□□□□ 0.17
IFT140-201ENST00000361339 SLC10A3P09131 477 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 PAMP19021 973 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 OR1E1P30953 314 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 RENBPP51606 427 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 NKX2-5P52952 324 aaPredicted RBP16.1■□□□□ 0.17
IFT140-201ENST00000361339 POU4F1Q01851 419 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 PRR23BQ6ZRT6 265 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 BEND5Q7L4P6 421 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 Q8N9G6 341 aaPredicted RBP16.1■□□□□ 0.17
IFT140-201ENST00000361339 OR7D4Q8NG98 312 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 TFAP2CQ92754 450 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 KCNA7Q96RP8 456 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 PIF1Q9H611 641 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 POLE4Q9NR33 117 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 WARS2Q9UGM6 360 aaKnown RBP16.1■□□□□ 0.17
IFT140-201ENST00000361339 DOCK4Q8N1I0 1966 aa16.1■□□□□ 0.17
IFT140-201ENST00000361339 OAZ2O95190 189 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 IDO1P14902 403 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 FOXA1P55317 472 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 POLD3Q15054 466 aaPredicted RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 ARMCX6Q7L4S7 300 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 HM13Q8TCT9 377 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 ANKRD60Q9BZ19 345 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 NDEL1Q9GZM8 345 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 MID2Q9UJV3 735 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 IKZF3Q9UKT9 509 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 VWA7Q9Y334 891 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 FNDC1Q4ZHG4 1894 aaPredicted RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 H3BMM5 538 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 GPR39O43194 453 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 IPO13O94829 963 aaKnown RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 SUPT7LO94864 414 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 BCL10O95999 233 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 GOT2P00505 430 aaKnown RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 LTA4HP09960 611 aaKnown RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 RHOQP17081 205 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 RPL17P18621 184 aaKnown RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 LEPRP48357 1165 aaKnown RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 CDKN1CP49918 316 aaPredicted RBP16.09■□□□□ 0.17
IFT140-201ENST00000361339 TUBA4AP68366 448 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 DUSP4Q13115 394 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 IGFN1Q86VF2 1251 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 TMEM126BQ8IUX1 230 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 EFHD1Q9BUP0 239 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
IFT140-201ENST00000361339 TMEM248Q9NWD8 314 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 POU2F3Q9UKI9 436 aa16.09■□□□□ 0.17
IFT140-201ENST00000361339 ADAM12O43184 909 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 MAN1A2O60476 641 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 GPC4O75487 556 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 FCGRTP55899 365 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 PRSS55Q6UWB4 352 aaPredicted RBP16.08■□□□□ 0.17
IFT140-201ENST00000361339 ISCA2Q86U28 154 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 DHFR2Q86XF0 187 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 CPSF7Q8N684 471 aaKnown RBP16.08■□□□□ 0.17
IFT140-201ENST00000361339 SGCDQ92629 289 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 ACDQ96AP0 544 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 UBXN10Q96LJ8 280 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 GSTO2Q9H4Y5 243 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 EPS8L2Q9H6S3 715 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 RGS18Q9NS28 235 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.08■□□□□ 0.17
IFT140-201ENST00000361339 OAZ3Q9UMX2 235 aa16.08■□□□□ 0.17
IFT140-201ENST00000361339 TET1Q8NFU7 2136 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 CCDC162PA2VCL2 907 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 AP3B1O00203 1094 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 RAMP2O60895 175 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 CNOT3O75175 753 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 SLC6A4P31645 630 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 POLR2IP36954 125 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 PRKAA2P54646 552 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 PIGFQ07326 219 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 MERTKQ12866 999 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 FAM83EQ2M2I3 478 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 TCTN1Q2MV58 587 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 RTP2Q5QGT7 225 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 OTUD3Q5T2D3 398 aaPredicted RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 C1orf74Q96LT6 269 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 UROC1Q96N76 676 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 FANCEQ9HB96 536 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 PCDHB5Q9Y5E4 795 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 A0A087X1B8 175 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 MROH6A6NGR9 719 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 ATP6V1B2P21281 511 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 ELK4P28324 431 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 EEF1DP29692 281 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 SGSHP51688 502 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 ACLYP53396 1101 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 RAD23AP54725 363 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 RPS24P62847 133 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 ECT2LQ008S8 904 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 NFATC3Q12968 1075 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 FASTKQ14296 549 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 NIPAL1Q6NVV3 410 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 SLC24A5Q71RS6 500 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms