RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DOCK9Q9BZ29 2069 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 GOLGA4Q13439 2230 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 C1orf232A0A0U1RR37 186 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NPIPB15A6NHN6 443 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NCF1BA6NI72 391 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 C2orf81A6NN90 581 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NCF1CA8MVU1 366 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 H3BMM5 538 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NEMP1O14524 444 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 LSM1O15116 133 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 STX7O15400 261 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SLC7A4O43246 635 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ZBTB14O43829 449 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NIPSNAP2O75323 286 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PGLSO95336 258 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CRTAMO95727 393 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 HSPA4LO95757 839 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CYBBP04839 570 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 MPOP05164 745 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 LINGO3P0C6S8 592 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NCF1P14598 390 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 HNF1BP35680 557 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 HADHAP40939 763 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 GRIA4P48058 902 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SLC6A11P48066 632 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 LEPRP48357 1165 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ERFP50548 548 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CLCN2P51788 898 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 DMPKQ09013 629 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PEX6Q13608 980 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF77Q15935 545 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 UGP2Q16851 508 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ARHGAP15Q53QZ3 475 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 AGAP9Q5VTM2 703 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ATG16L1Q676U5 607 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 RETSATQ6NUM9 610 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 DPY19L3Q6ZPD9 716 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NEK10Q6ZWH5 1172 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CACUL1Q86Y37 369 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CRLF3Q8IUI8 442 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CCDC117Q8IWD4 279 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SLC15A3Q8IY34 581 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SAMD14Q8IZD0 417 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ADGRG2Q8IZP9 1017 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CLDN19Q8N6F1 224 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SIDT2Q8NBJ9 832 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 FBXO27Q8NI29 283 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PHOSPHO2Q8TCD6 241 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 MAPK15Q8TD08 544 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PIH1D2Q8WWB5 315 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PMM1Q92871 262 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ISL2Q96A47 359 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 VOPP1Q96AW1 172 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PTERQ96BW5 349 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 LMLNQ96KR4 655 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 MARK4Q96L34 752 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 RILPQ96NA2 401 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PPP1R2P1Q96PQ5 205 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NR1H4Q96RI1 486 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 RANBP9Q96S59 729 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 BOCQ9BWV1 1114 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 VCXQ9H320 206 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 TNFRSF12AQ9NP84 129 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SPHK2Q9NRA0 654 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ARL8BQ9NVJ2 186 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 KIAA1522Q9P206 1035 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ZFP69BQ9UJL9 534 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SLC12A4Q9UP95 1085 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SATB2Q9UPW6 733 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 LZTS1Q9Y250 596 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 STK38LQ9Y2H1 464 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 VWA7Q9Y334 891 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NUMA1Q14980 2115 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 MUC3AQ02505 3323 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 KIF26AQ9ULI4 1882 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 VPS13AQ96RL7 3174 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PLK4O00444 970 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PPP6CO00743 305 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 FCHO1O14526 889 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SIN3BO75182 1162 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 XYLBO75191 536 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 KLHL2O95198 593 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 EPOP01588 193 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SERPINE1P05121 402 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PABPC1P11940 636 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 HLA-EP13747 358 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 POLR2EP19388 210 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 TFEBP19484 476 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 LPOP22079 712 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ACADVLP49748 655 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CLK1P49759 484 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CSRP3P50461 194 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CCNG1P51959 295 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 STC1P52823 247 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 EPHA5P54756 1037 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ABCE1P61221 599 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 KDSRQ06136 332 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 BCL2L1Q07817 233 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 RCN2Q14257 317 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms