RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZBTB14O43829 449 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 CRTAMO95727 393 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 MPSTP25325 297 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 STC1P52823 247 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 ZBTB16Q05516 673 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 TAF1AQ15573 450 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 ARHGAP15Q53QZ3 475 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 ZNF783Q6ZMS7 281 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 DPY19L3Q6ZPD9 716 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 CLNKQ7Z7G1 428 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 TREML1Q86YW5 311 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 ADGRG2Q8IZP9 1017 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 TTC30BQ8N4P2 665 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 GPR63Q9BZJ6 419 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 MED16Q9Y2X0 877 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 FIS1Q9Y3D6 152 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 F5P12259 2224 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 TRAFD1O14545 582 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 STX7O15400 261 aaKnown RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 FZD6O60353 706 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 XYLBO75191 536 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 KLHL2O95198 593 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 PGLSO95336 258 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 T-ENOLP0DO92 83 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 LPOP22079 712 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 HADHAP40939 763 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 CPA2P48052 419 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 GRIA4P48058 902 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 ALDH18A1P54886 795 aaKnown RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 POU4F1Q01851 419 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 BCL2L1Q07817 233 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 FOXD4Q12950 439 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 KRT72Q14CN4 511 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 ARMC12Q5T9G4 340 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 KIAA0408Q6ZU52 694 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 PTERQ96BW5 349 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 NKX2-4Q9H2Z4 354 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 OXSMQ9NWU1 459 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 FBXO9Q9UK97 447 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-202ENST00000358966 NPIPB15A6NHN6 443 aaPredicted RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TARM1B6A8C7 271 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 H3BMM5 538 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 JUNP05412 331 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UGT2B4P06133 528 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 PABPC1P11940 636 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 HNRNPLP14866 589 aaKnown RBP eCLIP12.57□□□□□ -0.43e-6■□□□□ 10.6
GGPS1-202ENST00000358966 ABCE1P61221 599 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UBAP2LQ14157 1087 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 CCDC6Q16204 474 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 C6orf183Q5T699 404 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TAS2R42Q7RTR8 314 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 ADIPOR2Q86V24 386 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 ACDQ96AP0 544 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 RILPQ96NA2 401 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TSNARE1Q96NA8 513 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TUBGCP5Q96RT8 1024 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 EBF3Q9H4W6 596 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 RETREG1Q9H6L5 497 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 SARS2Q9NP81 518 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 STOML1Q9UBI4 398 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 IKZF3Q9UKT9 509 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TSC22D4Q9Y3Q8 395 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UNC5CO95185 931 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 HSPA4LO95757 839 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 CD1EP15812 388 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UGT1A6P19224 532 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UGT1A1P22309 533 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UGT1A4P22310 534 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UGT1A3P35503 534 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 UGT1A5P35504 534 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 HNF1BP35680 557 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 CLCN5P51795 746 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 KPNB1Q14974 876 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 C22orf39Q6P5X5 142 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TRIM67Q6ZTA4 783 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 OR2AP1Q8NGE2 309 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 PIWIL2Q8TC59 973 aaKnown RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 SKA1Q96BD8 255 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 CIPCQ9C0C6 399 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 TNFRSF12AQ9NP84 129 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 ARL8BQ9NVJ2 186 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
GGPS1-202ENST00000358966 SPEGQ15772 3267 aa12.57□□□□□ -0.4
GGPS1-202ENST00000358966 GOLGA8QA0A0J9YX86 632 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 GOLGA8OA6NCC3 632 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 LRRC14BA6NHZ5 514 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 TTC34A8MYJ7 566 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 GOLGA8NF8WBI6 632 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 NEMP1O14524 444 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 LINC01565O15544 149 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 TRIM13O60858 407 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms