RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SHQ1Q6PI26 577 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 MILR1Q7Z6M3 343 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 C4orf32Q8N8J7 132 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NCSTNQ92542 709 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ITCHQ96J02 903 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 USP29Q9HBJ7 922 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 QPCTLQ9NXS2 382 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 KPNA5O15131 536 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ACOX3O15254 700 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CHST10O43529 356 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 GM2AP17900 193 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DSG3P32926 999 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 LCP2Q13094 533 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 MED22Q15528 200 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 UGT2A3Q6UWM9 527 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 OR52L1Q8NGH7 329 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CEP295NLQ96MC4 621 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 COL21A1Q96P44 957 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NOCTQ9UK39 431 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 LYVE1Q9Y5Y7 322 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CDC40O60508 579 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NTRK1P04629 796 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NFKB1P19838 968 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 STOMP27105 288 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 PPP2R2BQ00005 443 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ADNP2Q6IQ32 1131 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ATL1Q8WXF7 558 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SEC14L1Q92503 715 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CPB2Q96IY4 423 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ALPK1Q96QP1 1244 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 AIFM2Q9BRQ8 373 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF670Q9BS34 389 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SETD4Q9NVD3 440 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TRPC4Q9UBN4 977 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF112Q9UJU3 913 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TLN1Q9Y490 2541 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 WDR87Q6ZQQ6 2873 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TEX51A0A1B0GUA7 166 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 PSMA1P25786 263 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 GRK4P32298 578 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FAUP35544 74 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ZNF45Q02386 682 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ATAD3CQ5T2N8 411 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 UBE2J2Q8N2K1 259 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DEDD2Q8WXF8 326 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 GATA6Q92908 595 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 EXOC2Q96KP1 924 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 MIR1-1HGQ9H1L0 117 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CDC14AQ9UNH5 594 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CXCR6O00574 342 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ATXN8OSP0DMR3 200 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ITGB6P18564 788 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NDST2P52849 883 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 LIMK2P53671 638 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NFATC3Q12968 1075 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ACOX1Q15067 660 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SCIMPQ6UWF3 145 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ADCK2Q7Z695 626 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 C11orf96Q7Z7L8 435 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 GPR65Q8IYL9 337 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CYP2W1Q8TAV3 490 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NXF3Q9H4D5 531 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 KLQ9UEF7 1012 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 PPP2R3BQ9Y5P8 575 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 POLQO75417 2590 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TTC34A8MYJ7 566 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DLGAP1O14490 977 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 AQP9O43315 295 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NOBOXO60393 691 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 NPHS1O60500 1241 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 F9P00740 461 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CD4P01730 458 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 APOC3P02656 99 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FADDQ13158 208 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 HIST2H2ACQ16777 129 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 HIST2H2AA3Q6FI13 130 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 CXorf57Q6NSI4 855 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 IGFN1Q86VF2 1251 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 DSN1Q9H410 356 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SLC35C2Q9NQQ7 365 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TAS2R13Q9NYV9 303 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ENPP5Q9UJA9 477 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ST3GAL5Q9UNP4 418 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 GRIP1Q9Y3R0 1128 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 MAB21L2Q9Y586 359 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 UROSP10746 265 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ALDH1B1P30837 517 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ALDH7A1P49419 539 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 FUT2Q10981 343 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 HNRNPDQ14103 355 aaKnown RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 ARL13AQ5H913 290 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-203ENST00000358544 MOB2Q70IA6 237 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SCML4Q8N228 414 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SPERTQ8NA61 448 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 TRPV3Q8NET8 790 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 REPS1Q96D71 796 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SMOXQ9NWM0 555 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 PCDH10Q9P2E7 1040 aa6.04□□□□□ -1.44
VPS13B-203ENST00000358544 SERPINB7O75635 380 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms