RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 HACD2Q6Y1H2 254 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 CENPLQ8N0S6 344 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 CARNMT1Q8N4J0 409 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 SMYD1Q8NB12 490 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TLK1Q9UKI8 766 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 COL6A3P12111 3177 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 IGLV3-10A0A075B6K4 115 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 ZNF197O14709 1029 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TBL1XO60907 577 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 USP12O75317 370 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 BMP2P12643 396 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 ACVRL1P37023 503 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 ZNF135P52742 658 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 DNAJB13P59910 316 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 NRG1Q02297 640 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC12A1Q13621 1099 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 MAPRE2Q15555 327 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 LRIT3Q3SXY7 679 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 LRRC8EQ6NSJ5 796 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 ANKRD54Q6NXT1 300 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 PACRGLQ8N7B6 248 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 EFHBQ8N7U6 833 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 FAM156AQ8NDB6 213 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 GRIN3AQ8TCU5 1115 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 LPGAT1Q92604 370 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TFAP2CQ92754 450 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 HSPBAP1Q96EW2 488 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 PPP1R36Q96LQ0 422 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM79Q9BSE2 394 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 LINC00597Q9H2U6 94 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 ARMC1Q9NVT9 282 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM248Q9NWD8 314 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 MTCH2Q9Y6C9 303 aa12.62□□□□□ -0.39
RTFDC1-202ENST00000357348 HEATR9A2RTY3 570 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 TRIM64BA6NI03 449 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 DRGXA6NNA5 263 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 FBP2O00757 339 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 FGF19O95750 216 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 C1RP00736 705 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 F7P08709 466 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 FSHRP23945 695 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 ABCG1P45844 678 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CD97P48960 835 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 ZBED5Q49AG3 693 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 MTX3Q5HYI7 312 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 C6orf10Q5SRN2 563 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 NXNQ6DKJ4 435 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 Q6ZNB5 142 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 GPR180Q86V85 440 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CNTN4Q8IWV2 1026 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 ATPAF2Q8N5M1 289 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 LEMD2Q8NC56 503 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 FGF13Q92913 245 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CAAP1Q9H8G2 361 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 IARS2Q9NSE4 1012 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CLEC1BQ9P126 229 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 TMEM181Q9P2C4 612 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 SLC39A10Q9ULF5 831 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 ACTL7AQ9Y615 435 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 WNT6Q9Y6F9 365 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 PRORSD1PA6NEY8 169 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 H0Y626 953 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 J3KR12 359 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 PLOD2O00469 737 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 TPP2P29144 1249 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CD68P34810 354 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 ATXN3P54252 364 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 GALNT2Q10471 571 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 TMED1Q13445 227 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 SQLEQ14534 574 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 POLD3Q15054 466 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 CERCAMQ5T4B2 595 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 FAM45BPQ6NSW5 357 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 FAM45AQ8TCE6 357 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 KCTD4Q8WVF5 259 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 MARK4Q96L34 752 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 TSNARE1Q96NA8 513 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 LRRC3BQ96PB8 259 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 DOK1Q99704 481 aa12.61□□□□□ -0.39
RTFDC1-202ENST00000357348 SPON2Q9BUD6 331 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms