RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TNS4Q8IZW8 715 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 BSNDQ8WZ55 320 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF641Q96N77 438 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SP110Q9HB58 689 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SMOXQ9NWM0 555 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TAS2R13Q9NYV9 303 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CNTNAP1P78357 1384 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FAM149AA5PLN7 773 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RGS14O43566 566 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 IL7P13232 177 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RORCP51449 518 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF132P52740 706 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GJA9P57773 515 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PPP2R2BQ00005 443 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 UBE2UQ5VVX9 321 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 IDO2Q6ZQW0 420 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RETREG3Q86VR2 466 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF540Q8NDQ6 660 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FBXL20Q96IG2 436 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 MED28Q9H204 178 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PDZD7Q9H5P4 517 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 THUMPD1Q9NXG2 353 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KLHL21Q9UJP4 597 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 SULT1B1O43704 296 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ADAM23O75077 832 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ITGAMP11215 1152 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 MAB21L1Q13394 359 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 EIF4HQ15056 248 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KCNN1Q92952 543 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ISL2Q96A47 359 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NACC2Q96BF6 587 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KREMEN1Q96MU8 473 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 VPS35Q96QK1 796 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ITPAQ9BY32 194 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NIPAL2Q9H841 368 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 NT5DC2Q9H857 520 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 BTG4Q9NY30 223 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CDV3Q9UKY7 258 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CLDN24A6NM45 220 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 EI24O14681 340 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FOXD2O60548 495 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ALX3O95076 343 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 FADS2O95864 444 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 OTCP00480 354 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 VEGFAP15692 232 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RGS7P49802 495 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 UBXN2AP68543 259 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 TRIM71Q2Q1W2 868 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 COLEC12Q5KU26 742 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 ZNF782Q6ZMW2 699 aaPredicted RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 GDPD1Q8N9F7 314 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KAT5Q92993 513 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PPA2Q9H2U2 334 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 PIGUQ9H490 435 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 KANSL3Q9P2N6 904 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 OAZ3Q9UMX2 235 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 RUVBL2Q9Y230 463 aaKnown RBP6.54□□□□□ -1.36
TRIM38-201ENST00000357085 LYVE1Q9Y5Y7 322 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 CSADQ9Y600 493 aa6.54□□□□□ -1.36
TRIM38-201ENST00000357085 F8VP50 259 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 MEIS2O14770 477 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 UPK1BO75841 260 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 SLITRK5O94991 958 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CPNE6O95741 557 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CHRNA1P02708 482 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CHRNA5P30532 468 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 LEPRP48357 1165 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PCLAFQ15004 111 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 BCL2A1Q16548 175 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 KIZQ2M2Z5 673 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 GNASQ5JWF2 1037 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 OR8H3Q8N146 312 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CCDC24Q8N4L8 307 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ZSCAN5AQ9BUG6 496 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 MKL2Q9ULH7 1088 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 GREB1LQ9C091 1923 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 FGF1P05230 155 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 RETP07949 1114 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ETV3P41162 512 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 MAPK12P53778 367 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CDH4P55283 916 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ELOAQ14241 798 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ANKS6Q68DC2 871 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CHSY3Q70JA7 882 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ABI1Q8IZP0 508 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 OR8H1Q8NGG4 311 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 OR6P1Q8NGX9 317 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 CENPIQ92674 756 aaPredicted RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 THUMPD3Q9BV44 507 aaKnown RBP6.53□□□□□ -1.36
TRIM38-201ENST00000357085 RIBC2Q9H4K1 309 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 ARHGAP28Q9P2N2 729 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 UBE2QL1A1L167 161 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 H0YIN7 160 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 UROSP10746 265 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 IGFBP5P24593 272 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 MPSTP25325 297 aa6.53□□□□□ -1.36
TRIM38-201ENST00000357085 GCAP28676 217 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms