RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PRAMEF19Q5SWL8 479 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 SDHAF4Q5VUM1 108 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 ZNF773Q6PK81 442 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 DSG4Q86SJ6 1040 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 RAVER1Q8IY67 606 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 SFRP1Q8N474 314 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 FIG4Q92562 907 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CYP2S1Q96SQ9 504 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 IL12RB2Q99665 862 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 TBCDQ9BTW9 1192 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 RAD21L1Q9H4I0 556 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 SDR39U1Q9NRG7 319 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 DERAQ9Y315 318 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 TSC22D4Q9Y3Q8 395 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 ASB1Q9Y576 335 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 PCDHGA11Q9Y5H2 935 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 TRIM64A6NGJ6 449 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CDC7O00311 574 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 BCAS1O75363 584 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 DARSP14868 501 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 RCVRNP35243 200 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TGFBR1P36897 503 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 HCAR3P49019 387 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CLCQ05315 142 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TSNQ15631 228 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 BROXQ5VW32 411 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TMEM236Q5W0B7 351 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 PM20D1Q6GTS8 502 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CIR1Q86X95 450 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 SPARTQ8N0X7 666 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 DTWD1Q8N5C7 304 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 OR2T11Q8NH01 316 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 ZFP90Q8TF47 636 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 RSPH1Q8WYR4 309 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 GAD1Q99259 594 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CD320Q9NPF0 282 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CNGB3Q9NQW8 809 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 PSME2Q9UL46 239 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 NEU3Q9UQ49 428 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 PCDHB3Q9Y5E6 796 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 A0A0G2JMZ2 1700 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 A0A1W2PP18 115 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 HTR3EA5X5Y0 456 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 GPIP06744 558 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 HTR1AP08908 422 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 SMPD1P17405 629 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 WARSP23381 471 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 JAK1P23458 1154 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 MTHFRP42898 656 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 DGCR6Q14129 220 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 ENPP6Q6UWR7 440 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 RBM23Q86U06 439 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CDYL2Q8N8U2 506 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 PSD4Q8NDX1 1056 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 PPTC7Q8NI37 304 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CASP10Q92851 521 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TSPAN17Q96FV3 270 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 NSMCE2Q96MF7 247 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 ALOXE3Q9BYJ1 711 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 MIR1-1HGQ9H1L0 117 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 FAM124BQ9H5Z6 455 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 GALPQ9UBC7 116 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 UXTQ9UBK9 157 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 GPR45Q9Y5Y3 372 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 ACTL7AQ9Y615 435 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 BBIP1A8MTZ0 92 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 KDM1AO60341 852 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CACNG3O60359 315 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CYBBP04839 570 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 THRBP10828 461 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 FMO4P31512 558 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 HPCAL1P37235 193 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 DPY19L1Q2PZI1 675 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CTU2Q2VPK5 515 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 INTS6LQ5JSJ4 861 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 UBXN11Q5T124 520 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 NIPAL1Q6NVV3 410 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 PAQR3Q6TCH7 311 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CCDC81Q6ZN84 652 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TBC1D21Q8IYX1 336 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CADM3Q8N126 398 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 OR6J1Q8NGC5 347 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 KLHL25Q9H0H3 589 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 SLC52A3Q9NQ40 469 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 INTS10Q9NVR2 710 aaKnown RBP10.07□□□□□ -0.8
PTPRA-203ENST00000356147 CPQQ9Y646 472 aa10.07□□□□□ -0.8
PTPRA-203ENST00000356147 TTC36A6NLP5 189 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 HHLA1C9JL84 531 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 PSMD3O43242 534 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 TREHO43280 583 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 CAPN15O75808 1086 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SEC14L2O76054 403 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 SLC25A27O95847 323 aa10.06□□□□□ -0.8
PTPRA-203ENST00000356147 GOT2P00505 430 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms