RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PLEKHG6Q3KR16 790 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
GABPA-201ENST00000354828 CRELD2Q6UXH1 353 aaPredicted RBP9.66□□□□□ -0.86
GABPA-201ENST00000354828 PACS1Q6VY07 963 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 CMC1Q7Z7K0 106 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 LRRTM4Q86VH4 590 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 TRPV1Q8NER1 839 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 HNRNPLLQ8WVV9 542 aaKnown RBP9.66□□□□□ -0.86
GABPA-201ENST00000354828 TBCDQ9BTW9 1192 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 UGT1A7Q9HAW7 530 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 UGT1A10Q9HAW8 530 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 UGT1A8Q9HAW9 530 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 GDF3Q9NR23 364 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 ADPRHL2Q9NX46 363 aa9.66□□□□□ -0.86
GABPA-201ENST00000354828 SCN2BO60939 215 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 SLC25A12O75746 678 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 NR2F1P10589 423 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 GRIA4P48058 902 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 NUP107P57740 925 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.86
GABPA-201ENST00000354828 TRIM40Q6P9F5 258 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
GABPA-201ENST00000354828 AVL9Q8NBF6 648 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 RIN3Q8TB24 985 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 CCDC88AQ3V6T2 1871 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 LRATO95237 230 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 BUD31P41223 144 aaPredicted RBP9.65□□□□□ -0.86
GABPA-201ENST00000354828 ZBTB17Q13105 803 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 TRIP10Q15642 601 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 CCNYL2Q5T2Q4 361 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 C9orf64Q5T6V5 341 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 R3HCC1LQ7Z5L2 792 aaKnown RBP9.65□□□□□ -0.86
GABPA-201ENST00000354828 MFSD3Q96ES6 412 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 MCMBPQ9BTE3 642 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 ZSCAN5AQ9BUG6 496 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 PRRG3Q9BZD7 231 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 ERVK-11Q9UQG0 969 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 AK5Q9Y6K8 562 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 TCRBV9S1A1TA0A576 114 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 NBNO60934 754 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 TSHRP16473 764 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 NT5EP21589 574 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 TARSP26639 723 aaKnown RBP9.65□□□□□ -0.86
GABPA-201ENST00000354828 CHRNA4P43681 627 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 CLCNKAP51800 687 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 TAS2R50P59544 299 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 RNF44Q7L0R7 432 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 SNX20Q7Z614 316 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 MCEMP1Q8IX19 187 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 NCSTNQ92542 709 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 CAVIN3Q969G5 261 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 CCT7Q99832 543 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 EXOSC4Q9NPD3 245 aaKnown RBP9.65□□□□□ -0.86
GABPA-201ENST00000354828 ARL5AQ9Y689 179 aa9.65□□□□□ -0.86
GABPA-201ENST00000354828 C16orf96A6NNT2 1141 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 PTGESO14684 152 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 CNTN5O94779 1100 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 PAK4O96013 591 aaPredicted RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 KLK3P07288 261 aaPredicted RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 NTSR1P30989 418 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 PTGER3P43115 390 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 IRX1P78414 480 aaPredicted RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 IFI35P80217 286 aaPredicted RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 TRAF2Q12933 501 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 SHHQ15465 462 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 FBXO43Q4G163 708 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 ZC3H7AQ8IWR0 971 aaKnown RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 UNC5BQ8IZJ1 945 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 KIF2BQ8N4N8 673 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 ATG16L2Q8NAA4 619 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 RBM18Q96H35 190 aaKnown RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 TTYH3Q9C0H2 523 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 STRADBQ9C0K7 418 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 POLR1BQ9H9Y6 1135 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 C3orf14Q9HBI5 128 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 SIX2Q9NPC8 291 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 SUCOQ9UBS9 1254 aaKnown RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.87
GABPA-201ENST00000354828 MTF2Q9Y483 593 aaPredicted RBP9.65□□□□□ -0.87
GABPA-201ENST00000354828 FAM170BA6NMN3 283 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 MRASO14807 208 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 OAZ2O95190 189 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 MLLT3P42568 568 aaPredicted RBP9.64□□□□□ -0.87
GABPA-201ENST00000354828 LSM12Q3MHD2 195 aaKnown RBP9.64□□□□□ -0.87
GABPA-201ENST00000354828 MTDHQ86UE4 582 aaKnown RBP9.64□□□□□ -0.87
GABPA-201ENST00000354828 COMMD2Q86X83 199 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 MRPL43Q8N983 215 aaKnown RBP9.64□□□□□ -0.87
GABPA-201ENST00000354828 KIAA1143Q96AT1 154 aaPredicted RBP9.64□□□□□ -0.87
GABPA-201ENST00000354828 SLC22A18Q96BI1 424 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 PPCDCQ96CD2 204 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 JSRP1Q96MG2 331 aaPredicted RBP9.64□□□□□ -0.87
GABPA-201ENST00000354828 SCN3BQ9NY72 215 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 CROTQ9UKG9 612 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 KCNK6Q9Y257 313 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 FAM237BA0A1B0GVD1 139 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 MATN4O95460 622 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 ALBP02768 609 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 HLA-DQB2P05538 268 aa9.64□□□□□ -0.87
GABPA-201ENST00000354828 HNRNPLP14866 589 aaKnown RBP eCLIP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms