RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SERPINI1Q99574 410 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 ATP13A3Q9H7F0 1226 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 MID1IP1Q9NPA3 183 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 NMRK1Q9NWW6 199 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 CCL26Q9Y258 94 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 IRAK3Q9Y616 596 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 DOCK6Q96HP0 2047 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 NPEPPSL1A6NEC2 478 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 E5RI56 91 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 STX16-NPEPL1H3BU86 382 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 STX16O14662 325 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 TLL1O43897 1013 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 EEF1DP29692 281 aaKnown RBP20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 CCNIQ14094 377 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 DGKKQ5KSL6 1271 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 PGAM4Q8N0Y7 254 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 MICAL1Q8TDZ2 1067 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 EEF1AKMT1Q8WVE0 214 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 DNAJC9Q8WXX5 260 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 NSUN5Q96P11 429 aaKnown RBP20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 PCDHB1Q9Y5F3 818 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 DNAJC15Q9Y5T4 150 aa20.2■□□□□ 0.83
CHRNA3-202ENST00000348639 PPP6CO00743 305 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 PRMT5O14744 637 aaPredicted RBP20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 AZIN1O14977 448 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 GPR39O43194 453 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 RFPL2O75678 378 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 GKP32189 559 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 ERFP50548 548 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 CLCQ05315 142 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 MUM1Q2TAK8 710 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 KANK2Q63ZY3 851 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 ANKS6Q68DC2 871 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 OR2AP1Q8NGE2 309 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 GRIN3AQ8TCU5 1115 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 LINGO1Q96FE5 620 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 RAD9AQ99638 391 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 C1QTNF3Q9BXJ4 246 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 TNKS2Q9H2K2 1166 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 S100A14Q9HCY8 104 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 TMCO1Q9UM00 188 aa20.2■□□□□ 0.82
CHRNA3-202ENST00000348639 C1orf232A0A0U1RR37 186 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 RPS17P08708 135 aaKnown RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 ARSAP15289 507 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 CLCN7P51798 805 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 LCP2Q13094 533 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 ART3Q13508 389 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 PTK2BQ14289 1009 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 MAPRE2Q15555 327 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 CDKN3Q16667 212 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 TCHHL1Q5QJ38 904 aaPredicted RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 TXNDC11Q6PKC3 985 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 BNC2Q6ZN30 1099 aaPredicted RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 CMTM8Q8IZV2 173 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 EFCAB3Q8N7B9 438 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 MRPL43Q8N983 215 aaKnown RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 HMGCLL1Q8TB92 370 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 TRPC4APQ8TEL6 797 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 TCEAL4Q96EI5 215 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 RPL10LQ96L21 214 aaKnown RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 GOLGA8CPA6NN73 597 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 PSMD12O00232 456 aaPredicted RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 GAPDHSO14556 408 aaPredicted RBP20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 PRAMEF1O95521 474 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 HNF1BP35680 557 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 BMPR1AP36894 532 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 ATP4BP51164 291 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 PITRM1Q5JRX3 1037 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 FAM151BQ6UXP7 276 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 ADGRG6Q86SQ4 1221 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 PPFIBP2Q8ND30 876 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 POF1BQ8WVV4 589 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 C3orf30Q96M34 536 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 CDRT15Q96T59 188 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 WDR41Q9HAD4 459 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 APPL1Q9UKG1 709 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 PPM1HQ9ULR3 514 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 DHRS7Q9Y394 339 aa20.19■□□□□ 0.82
CHRNA3-202ENST00000348639 CAPN8A6NHC0 703 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 SRCP12931 536 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 BMP1P13497 986 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 ACADSP16219 412 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 ZNF7P17097 686 aaPredicted RBP20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 ATP6V1C1P21283 382 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 SERPINA4P29622 427 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 STX5Q13190 355 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 FASTKQ14296 549 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 GEN1Q17RS7 908 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 TMEM240Q5SV17 173 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 GK5Q6ZS86 529 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 SNX20Q7Z614 316 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 SERPINA9Q86WD7 417 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 GPSM1Q86YR5 675 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 CPNE9Q8IYJ1 553 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 TWIST2Q8WVJ9 160 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 ISG20Q96AZ6 181 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 PDLIM5Q96HC4 596 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 TTC1Q99614 292 aa20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 UTP6Q9NYH9 597 aaKnown RBP20.18■□□□□ 0.82
CHRNA3-202ENST00000348639 HS3ST2Q9Y278 367 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms