RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 STC1P52823 247 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CLNS1AP54105 237 aaKnown RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 KCNJ2P63252 427 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ZBTB16Q05516 673 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CBX2Q14781 532 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ARHGAP15Q53QZ3 475 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 PITRM1Q5JRX3 1037 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 PRSS36Q5K4E3 855 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 DGKKQ5KSL6 1271 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 MRNIPQ6NTE8 343 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 MAVSQ7Z434 540 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CLNKQ7Z7G1 428 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TBC1D1Q86TI0 1168 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 LCA5Q86VQ0 697 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 LMNTD2Q8IXW0 634 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TTC30BQ8N4P2 665 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TTC8Q8TAM2 541 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 PIWIL2Q8TC59 973 aaKnown RBP9.2□□□□□ -0.94
ATG4A-202ENST00000345734 ACDQ96AP0 544 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 FAM136AQ96C01 138 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 PLEKHG4BQ96PX9 1271 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 FAM96AQ9H5X1 160 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 CERS4Q9HA82 394 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 TDP1Q9NUW8 608 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 HAO1Q9UJM8 370 aa9.2□□□□□ -0.94
ATG4A-202ENST00000345734 UNC5CO95185 931 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PGLSO95336 258 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 WISP3O95389 354 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 FGF19O95750 216 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 CEBPBP17676 345 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 OGNP20774 298 aaKnown RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PMLP29590 882 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 EPHB1P54762 984 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PCBP4P57723 403 aaKnown RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 AP1S1P61966 158 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF77Q15935 545 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 FUT11Q495W5 492 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ARMC12Q5T9G4 340 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 LIPMQ5VYY2 423 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 AFTPHQ6ULP2 937 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ADAMTSL4Q6UY14 1074 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ADGRD2Q7Z7M1 963 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PIANPQ8IYJ0 282 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF781Q8N8C0 355 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 RDH11Q8TC12 318 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PPP4R1Q8TF05 950 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PIH1D2Q8WWB5 315 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF707Q96C28 371 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 EID2BQ96D98 161 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TMEM237Q96Q45 408 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SLX1AQ9BQ83 275 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 LBHD1Q9BQE6 289 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 NMUR2Q9GZQ4 415 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SLC40A1Q9NP59 571 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ARMCX1Q9P291 453 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 UNC80Q8N2C7 3258 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SCN8AQ9UQD0 1980 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 C2orf16Q68DN1 1984 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 NEMP2A6NFY4 417 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 FCHO1O14526 889 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TRAFD1O14545 582 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 GPR39O43194 453 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 AHCYL1O43865 530 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 HSPA4LO95757 839 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 RB1P06400 928 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 CHRNGP07510 517 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SRCP12931 536 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 FDXRP22570 491 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SP100P23497 879 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PSMA3P25788 255 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 HOXA9P31269 272 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 MC4RP32245 332 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SOX18P35713 384 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PLK1P53350 603 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TMED1Q13445 227 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TYSND1Q2T9J0 566 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 VWA5B1Q5TIE3 1220 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ASRGL1Q7L266 308 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 RTL10Q7L3V2 364 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 RYBPQ8N488 228 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 C12orf76Q8N812 135 aaPredicted RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TXNDC5Q8NBS9 432 aaKnown RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 MYLIPQ8WY64 445 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 IRF7Q92985 503 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 VOPP1Q96AW1 172 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 KLHL29Q96CT2 875 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TSPAN17Q96FV3 270 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 UBXN10Q96LJ8 280 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 MRPL57Q9BQC6 102 aaKnown RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 BBS2Q9BXC9 721 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 MTIF3Q9H2K0 278 aaKnown RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 MRPL46Q9H2W6 279 aaKnown RBP9.19□□□□□ -0.94
ATG4A-202ENST00000345734 TXLNGQ9NUQ3 528 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ARL8BQ9NVJ2 186 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 SUN2Q9UH99 717 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 MID2Q9UJV3 735 aa9.19□□□□□ -0.94
ATG4A-202ENST00000345734 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms