RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ZNF648Q5T619 568 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 SLC25A41Q8N5S1 370 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 WDR36Q8NI36 951 aaKnown RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 GRAMD1AQ96CP6 724 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 LIN37Q96GY3 246 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 FCRL3Q96P31 734 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 VAT1Q99536 393 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 SPATA16Q9BXB7 569 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 GPR63Q9BZJ6 419 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 CDH19Q9H159 772 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 EPB41L5Q9HCM4 733 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 VPS18Q9P253 973 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 NFKBIL1Q9UBC1 381 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 AMFRQ9UKV5 643 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 CAPN6Q9Y6Q1 641 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 AGRPO00253 132 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 B4GAT1O43505 415 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 TNFSF15O95150 251 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 EML2O95834 649 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 FTCDO95954 541 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 PNLIPP16233 465 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 ZFP36L1Q07352 338 aaKnown RBP14.29□□□□□ -0.12
HMGN3-202ENST00000344726 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 SLC1A5Q15758 541 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 CCDC181Q5TID7 509 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 PEX26Q7Z412 305 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 ZNF438Q7Z4V0 828 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 GALNT13Q8IUC8 556 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 ARL14Q8N4G2 192 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 IPMKQ8NFU5 416 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 GBA3Q9H227 469 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 BPIFA1Q9NP55 256 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 THSD1Q9NS62 852 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 ATXN10Q9UBB4 475 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 RSPH14Q9UHP6 348 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 ZNHIT2Q9UHR6 403 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 TRHDEQ9UKU6 1024 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 TMPRSS11EQ9UL52 423 aa14.29□□□□□ -0.12
HMGN3-202ENST00000344726 PPM1DO15297 605 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 EPOP01588 193 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 RBP3P10745 1247 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 CCKBRP32239 447 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 UGT1A5P35504 534 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 INHBCP55103 352 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 OR1D5P58170 312 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 EIF3EP60228 445 aaKnown RBP14.28□□□□□ -0.12
HMGN3-202ENST00000344726 MPP3Q13368 585 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 OLIG2Q13516 323 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 COL9A2Q14055 689 aaPredicted RBP14.28□□□□□ -0.12
HMGN3-202ENST00000344726 NR1D2Q14995 579 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 KHDC1Q4VXA5 237 aaKnown RBP14.28□□□□□ -0.12
HMGN3-202ENST00000344726 ZNF569Q5MCW4 686 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 CCDC70Q6NSX1 233 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 PCSK4Q6UW60 755 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 CDKL3Q8IVW4 592 aaPredicted RBP14.28□□□□□ -0.12
HMGN3-202ENST00000344726 SLITRK4Q8IW52 837 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 TRAM1L1Q8N609 369 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 KCNE4Q8WWG9 221 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 ZSCAN5AQ9BUG6 496 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 SEMA6CQ9H3T2 930 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 RDH14Q9HBH5 336 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 CPNE5Q9HCH3 593 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
HMGN3-202ENST00000344726 TCRBV7S2A1N4TA0A589 114 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 PLD2O14939 933 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 KCNN4O15554 427 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 NUAK1O60285 661 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 AGTP01019 485 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ITGA2BP08514 1039 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ZNF8P17098 575 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ITIH1P19827 911 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 PSMB4P28070 264 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 RBMS1P29558 406 aaKnown RBP14.27□□□□□ -0.13
HMGN3-202ENST00000344726 CA5AP35218 305 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 HMGCLP35914 325 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 CXADRP78310 365 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 KLF1Q13351 362 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-202ENST00000344726 LRP8Q14114 963 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ANKRD20A2Q5SQ80 823 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ANKRD20A1Q5TYW2 823 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ZNF574Q6ZN55 896 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-202ENST00000344726 RAB11FIP2Q7L804 512 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 CHST15Q7LFX5 561 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-202ENST00000344726 ADGRG6Q86SQ4 1221 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 GLYATL1Q969I3 302 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 HES6Q96HZ4 224 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 NUDT22Q9BRQ3 303 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 OR2AG1Q9H205 316 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 CARD9Q9H257 536 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 IL17CQ9P0M4 197 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 TBC1D29Q9UFV1 150 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 KCNK6Q9Y257 313 aa14.27□□□□□ -0.13
HMGN3-202ENST00000344726 R3HDM2Q9Y2K5 976 aaKnown RBP14.27□□□□□ -0.13
HMGN3-202ENST00000344726 PIKFYVEQ9Y2I7 2098 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 TRBV23OR9-2A0A075B6M9 112 aa14.26□□□□□ -0.13
HMGN3-202ENST00000344726 A6NCN8 305 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms