RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SPATA2LQ8IUW3 424 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SKA2Q8WVK7 121 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 UFD1Q92890 307 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MAELQ96JY0 434 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GLT1D1Q96MS3 346 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NMNAT1Q9HAN9 279 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PTPRHQ9HD43 1115 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 KMT5AQ9NQR1 393 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 IGSF9BQ9UPX0 1349 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 A8MUA0 341 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SH2B2O14492 632 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ANXA3P12429 323 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NDUFA8P51970 172 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PRKAA1Q13131 559 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 OXR1Q8N573 874 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SERPINB11Q96P15 392 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 WDR11Q9BZH6 1224 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 VPS51Q9UID3 782 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 HS6ST1O60243 411 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CDC42P60953 191 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MAD2L1Q13257 205 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RAB11BQ15907 218 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PLEKHN1Q494U1 663 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 UBAP2Q5T6F2 1119 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 METAP1DQ6UB28 335 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLC36A4Q6YBV0 504 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RNF19BQ6ZMZ0 732 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FAM160B2Q86V87 743 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ANKLE2Q86XL3 938 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 KIAA1586Q9HCI6 787 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NDFIP2Q9NV92 336 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM161AQ9NX61 479 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MYH11P35749 1972 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PNMA6FA0A0J9YX94 578 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLC28A2O43868 658 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 APBB3O95704 486 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GPIP06744 558 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LCN1P31025 176 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 HOXC13P31276 330 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FAM46CQ5VWP2 391 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PAMR1Q6UXH9 720 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CYP4X1Q8N118 509 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 KDF1Q8NAX2 398 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 AURKBQ96GD4 344 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 WRNIP1Q96S55 665 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LGMNQ99538 433 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FNIP2Q9P278 1114 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 KLF15Q9UIH9 416 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SLC25A13Q9UJS0 675 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CLUHO75153 1309 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ATG13O75143 517 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 IFNA2P01563 188 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PPP3CBP16298 524 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CLCNKBP51801 687 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ARSFP54793 590 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TOR1AIP1Q5JTV8 583 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF57Q68EA5 555 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TTLQ8NG68 377 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CLCC1Q96S66 551 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SAMD9LQ8IVG5 1584 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CEP170BQ9Y4F5 1589 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PLIN3O60664 434 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CCNOP22674 350 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SULT6B1Q6IMI4 303 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FAM35AQ86V20 835 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ZZZ3Q8IYH5 903 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TCTE3Q8IZS6 198 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DNAJB8Q8NHS0 232 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ARL11Q969Q4 196 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TLR10Q9BXR5 811 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 C1orf109Q9NX04 203 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF608Q9ULD9 1512 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 POLD3Q15054 466 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CALCRLQ16602 461 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MFSD6LQ8IWD5 586 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF680Q8NEM1 530 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF577Q9BSK1 485 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NXF2Q9GZY0 626 aaKnown RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 DTLQ9NZJ0 730 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NDRG3Q9UGV2 375 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 GTF2IRD1Q9UHL9 959 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 LEF1Q9UJU2 399 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TRDCB7Z8K6 153 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PRPSAP2O60256 369 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PIP5K1CO60331 668 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 MOCS3O95396 460 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 IFNGP01579 166 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TFAP2AP05549 437 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 ECHS1P30084 290 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 NKX6-1P78426 367 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 FOXO1Q12778 655 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 SCARA5Q6ZMJ2 495 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 CNTD1Q8N815 330 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 TRIM54Q9BYV2 358 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 WASH6PQ9NQA3 447 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 PRMT8Q9NR22 394 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-202ENST00000344113 JAG2Q9Y219 1238 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 BCL9O00512 1426 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 AQP12BA6NM10 295 aa3.74□□□□□ -1.81
SYNE2-202ENST00000344113 RDH16O75452 317 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms