RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LRRC43Q8N309 656 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PAF1Q8N7H5 531 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PCYOX1LQ8NBM8 494 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CATSPER1Q8NEC5 780 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PDZD8Q8NEN9 1154 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 SLCO4A1Q96BD0 722 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PPWD1Q96BP3 646 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PLD4Q96BZ4 506 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CENPKQ9BS16 269 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ADGRE3Q9BY15 652 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 TM6SF2Q9BZW4 377 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PAPOLBQ9NRJ5 636 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CD274Q9NZQ7 290 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 MAP10Q9P2G4 905 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 CD300AQ9UGN4 299 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 EGFL7Q9UHF1 273 aa14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 EIF2B4Q9UI10 523 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 ARIH1Q9Y4X5 557 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-202ENST00000343765 PRRC2BQ5JSZ5 2229 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 PRAMEF12O95522 483 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ETS2P15036 469 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ACADVLP49748 655 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ATP4BP51164 291 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ATN1P54259 1190 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ATP6V0D1P61421 351 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 RHDQ02161 417 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 NOGQ13253 232 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 GRM2Q14416 872 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 MTX3Q5HYI7 312 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 SPOUT1Q5T280 376 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 TMCO2Q7Z6W1 182 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 SYVN1Q86TM6 617 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 SATL1Q86VE3 508 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 CCDC97Q96F63 343 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 CDK15Q96Q40 435 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 CLSTN3Q9BQT9 956 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 TMEM175Q9BSA9 504 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 C1orf50Q9BV19 199 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 FAM192AQ9GZU8 254 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 OAS3Q9Y6K5 1087 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 SNX2O60749 519 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 CD160O95971 181 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 C8BP07358 591 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ALPIP09923 528 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 ITGB6P18564 788 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 CASP2P42575 452 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 PSMD8P48556 350 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 APLP1P51693 650 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 HK3P52790 923 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 IYDQ6PHW0 289 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 DHFR2Q86XF0 187 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 PIP4K2CQ8TBX8 421 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 VPS33AQ96AX1 596 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 HGH1Q9BTY7 390 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
VIPAS39-202ENST00000343765 SYCE1LA8MT33 242 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 K7ERQ8 282 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 NME4O00746 187 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 HOXA2O43364 376 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 TIPRLO75663 272 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 ATP6V1B2P21281 511 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 CES1P23141 567 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 HABP4Q5JVS0 413 aaKnown RBP14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 FAM117BQ6P1L5 589 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 SLC30A9Q6PML9 568 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 GPSM1Q86YR5 675 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 MARVELD2Q8N4S9 558 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 CD200R1Q8TD46 325 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 TEX37Q96LM6 180 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 SLC22A12Q96S37 553 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 HBEGFQ99075 208 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 TCF12Q99081 682 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 COQ10BQ9H8M1 238 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 RAB26Q9ULW5 256 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 COMMD10Q9Y6G5 202 aa14.77□□□□□ -0.04
VIPAS39-202ENST00000343765 CHD5Q8TDI0 1954 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 DENRO43583 198 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 BAIAP3O94812 1187 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 STAMBPO95630 424 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 TSPAN12O95859 305 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 FESP07332 822 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 RPS17P08708 135 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 ATP6V1B1P15313 513 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 TTPAP49638 278 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 IL2P60568 153 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 RHOAP61586 193 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 SMAD3P84022 425 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 C18orf21Q32NC0 220 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 CNPY1Q3B7I2 92 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 C8orf82Q6P1X6 216 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 NKAPQ8N5F7 415 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 CIB1Q99828 191 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 GPR63Q9BZJ6 419 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 NOL11Q9H8H0 719 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 ZNF225Q9UK10 706 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 PCTPQ9UKL6 214 aa14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 CNOT6Q9ULM6 557 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-202ENST00000343765 AURKCQ9UQB9 309 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms