RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 GABRR2P28476 465 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 SLC7A1P30825 629 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 KIR3DL1P43629 444 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 SLC16A1P53985 500 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 CDH4P55283 916 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ALDH6A1Q02252 535 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 XKR6Q5GH73 641 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TAPT1Q6NXT6 567 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 FBXL19Q6PCT2 694 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PHACTR4Q8IZ21 702 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZNF540Q8NDQ6 660 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 REPS1Q96D71 796 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 CHID1Q9BWS9 393 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 MFSD1Q9H3U5 465 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 NMUR1Q9HB89 426 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 KRT84Q9NSB2 600 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TMEM39AQ9NV64 488 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 HS3ST4Q9Y661 456 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 URB1O60287 2271 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 GLYATL1P3A0A0U1RQE8 302 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 H3BNX3 289 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 KPNA5O15131 536 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 UGT2B4P06133 528 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 POLR2EP19388 210 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 HPCAL1P37235 193 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 RFX3P48380 749 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 C1DQ13901 141 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 CYP2A13Q16696 494 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PAGE2BQ5JRK9 111 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TMEM174Q8WUU8 243 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZBED3Q96IU2 234 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZNF778Q96MU6 729 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 FCRL3Q96P31 734 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 NUSAP1Q9BXS6 441 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 TFB2MQ9H5Q4 396 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 SQORQ9Y6N5 450 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 LOC100506127A0A0U1RQW1 187 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PCDH8O95206 1070 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 OAS1P00973 400 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 ITPKAP23677 461 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PTGER3P43115 390 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.14□□□□□ -1.27
VCAN-202ENST00000342785 POM121L1PQ3SYA9 428 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 UBE2R2Q712K3 238 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 CORO1BQ9BR76 489 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TMEM106CQ9BVX2 250 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ATG10Q9H0Y0 220 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TMEM245Q9H330 911 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ATAD3AQ9NVI7 634 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ATXN10Q9UBB4 475 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 GALPQ9UBC7 116 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ENOPH1Q9UHY7 261 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZNF490Q9ULM2 529 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 TLR6Q9Y2C9 796 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZFP37Q9Y6Q3 630 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 IQCF3P0C7M6 154 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 GALK1P51570 392 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PGGT1BP53609 377 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 MTTPP55157 894 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 HERVK_113P63132 956 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZNF33AQ06730 810 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PERM1Q5SV97 790 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 RPS27LQ71UM5 84 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 THAP5Q7Z6K1 395 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 METTL3Q86U44 580 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 RTP4Q96DX8 246 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ERVK-6Q9BXR3 956 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 AKTIPQ9H8T0 292 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TRMT13Q9NUP7 481 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 TDRKHQ9Y2W6 561 aaKnown RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 TRIM17Q9Y577 477 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ARL5AQ9Y689 179 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 TIAM2Q8IVF5 1701 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 AQP12BA6NM10 295 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 HOXA11P31270 313 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 RHDQ02161 417 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 CACNG1Q06432 222 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 PHKG1Q16816 387 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 CGB2Q6NT52 195 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 CASP12Q6UXS9 341 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 AQP12AQ8IXF9 295 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ZNF557Q8N988 423 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 ITCHQ96J02 903 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 SUSD3Q96L08 255 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 NUDT4Q9NZJ9 180 aa7.14□□□□□ -1.27
VCAN-202ENST00000342785 ELOVL7A1L3X0 281 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 NIPSNAP2O75323 286 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CNTN5O94779 1100 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ZBTB11O95625 1053 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 PRKCGP05129 697 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 DHRS4L1P0CG22 281 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 NCF4Q15080 339 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SFT2D3Q587I9 215 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SPANXN2Q5MJ10 180 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 TYW3Q6IPR3 259 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 RASAL3Q86YV0 1011 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 PGBD3Q8N328 593 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 MOCOSQ96EN8 888 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 REXO5Q96IC2 774 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 MUC13Q9H3R2 512 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms