RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OGFOD3Q6PK18 319 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 IGF2-ASQ6U949 168 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 ARHGEF18Q6ZSZ5 1173 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 EFL1Q7Z2Z2 1120 aaKnown RBP15.26■□□□□ 0.03
VAPA-201ENST00000340541 GPR155Q7Z3F1 870 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 ARL10Q8N8L6 244 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 ZNF248Q8NDW4 579 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 GPR156Q8NFN8 814 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 IFI44Q8TCB0 444 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 BLOC1S5Q8TDH9 187 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 SCG3Q8WXD2 468 aaKnown RBP15.26■□□□□ 0.03
VAPA-201ENST00000340541 PLEKHG4BQ96PX9 1271 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 ZSCAN5AQ9BUG6 496 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
VAPA-201ENST00000340541 SUDS3Q9H7L9 328 aaPredicted RBP15.26■□□□□ 0.03
VAPA-201ENST00000340541 ARNT2Q9HBZ2 717 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 BPIFA1Q9NP55 256 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 SIRPGQ9P1W8 387 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 TMPRSS11EQ9UL52 423 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 GPR34Q9UPC5 381 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 DOLKQ9UPQ8 538 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 PLEKHM1Q9Y4G2 1056 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 SMG1Q96Q15 3661 aaKnown RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 CPED1A4D0V7 1026 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 GAPDHSO14556 408 aaPredicted RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 CASC3O15234 703 aaKnown RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 NOBOXO60393 691 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 USP12O75317 370 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 AK4P27144 223 aaPredicted RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 ADCY8P40145 1251 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 TNNT3P45378 269 aaPredicted RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 UCNP55089 124 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 CTBSQ01459 385 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 TLE3Q04726 772 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 SPARCL1Q14515 664 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 P3H1Q32P28 736 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 PDPK2PQ6A1A2 396 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 MARK2Q7KZI7 788 aaKnown RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 GLT6D1Q7Z4J2 308 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 TAF8Q7Z7C8 310 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 FAM46DQ8NEK8 389 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 DTX3LQ8TDB6 740 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 SLC39A7Q92504 469 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 GLMNQ92990 594 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 FCRL3Q96P31 734 aaPredicted RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 PPP1R2P1Q96PQ5 205 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 OR2M4Q96R27 311 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 SPATA16Q9BXB7 569 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 POLR1BQ9H9Y6 1135 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 IL26Q9NPH9 171 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 SPATS2LQ9NUQ6 558 aaKnown RBP15.25■□□□□ 0.03
VAPA-201ENST00000340541 PADI4Q9UM07 663 aa15.25■□□□□ 0.03
VAPA-201ENST00000340541 BUD23O43709 281 aaKnown RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 FGGP02679 453 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 STIP1P31948 543 aaKnown RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 CXCR5P32302 372 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 RPIAP49247 311 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 PCBP4P57723 403 aaKnown RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
VAPA-201ENST00000340541 PTPRCAPQ14761 206 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 CCNG2Q16589 344 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 KHDC1Q4VXA5 237 aaKnown RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 ZNF569Q5MCW4 686 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 ZNF648Q5T619 568 aaPredicted RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 C17orf82Q86X59 251 aaPredicted RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 SPACA3Q8IXA5 215 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 GLIS1Q8NBF1 620 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 WDR48Q8TAF3 677 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 GLYATL1Q969I3 302 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 VPS35Q96QK1 796 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 TBL1YQ9BQ87 522 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 GSDMCQ9BYG8 508 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 DPH1Q9BZG8 443 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 ARFGAP3Q9NP61 516 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 TAAR2Q9P1P5 351 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 ATXN10Q9UBB4 475 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 GULP1Q9UBP9 304 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 RABGEF1Q9UJ41 708 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 ARL5AQ9Y689 179 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 PTPRQQ9UMZ3 2332 aa15.24■□□□□ 0.03
VAPA-201ENST00000340541 GCN1Q92616 2671 aaKnown RBP15.24■□□□□ 0.03
VAPA-201ENST00000340541 NUAK1O60285 661 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 CSO75390 466 aaKnown RBP15.23■□□□□ 0.03
VAPA-201ENST00000340541 ASMTLO95671 621 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 CA5AP35218 305 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 SNX1Q13596 522 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 TAF1AQ15573 450 aaPredicted RBP15.23■□□□□ 0.03
VAPA-201ENST00000340541 ATP13A5Q4VNC0 1218 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 BROXQ5VW32 411 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 DRICH1Q6PGQ1 229 aaPredicted RBP15.23■□□□□ 0.03
VAPA-201ENST00000340541 ADGRG6Q86SQ4 1221 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 GALNT13Q8IUC8 556 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 TAB3Q8N5C8 712 aaPredicted RBP15.23■□□□□ 0.03
VAPA-201ENST00000340541 MAPK15Q8TD08 544 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 NAT6Q93015 286 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 WBP1Q96G27 269 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 DPEP2Q9H4A9 486 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
VAPA-201ENST00000340541 TRIM39Q9HCM9 518 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms