RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CDK10Q15131 360 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 PAGE3Q5JUK9 113 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 VARS2Q5ST30 1063 aaKnown RBP9.35□□□□□ -0.91
NECAP1-201ENST00000339754 AGAP6Q5VW22 663 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 CCBE1Q6UXH8 406 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-201ENST00000339754 RALGPS2Q86X27 583 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-201ENST00000339754 PROSER1Q86XN7 944 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 RNF135Q8IUD6 432 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 ZDHHC17Q8IUH5 632 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 MTMR14Q8NCE2 650 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 FIG4Q92562 907 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 RORBQ92753 470 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 BHMTQ93088 406 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 LGALS12Q96DT0 336 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 ZNF560Q96MR9 790 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 AGAP4Q96P64 663 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 RPF1Q9H9Y2 349 aaKnown RBP9.35□□□□□ -0.91
NECAP1-201ENST00000339754 CNGB3Q9NQW8 809 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 SLAMF8Q9P0V8 285 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 ERVK-18Q9QC07 812 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
NECAP1-201ENST00000339754 MN1Q10571 1320 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-201ENST00000339754 A0A1W2PP18 115 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 SAGE2PA6NJ88 616 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 G3V2T6 193 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 H3BMM5 538 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 B4GALT5O43286 388 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 XPNPEP2O43895 674 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 NOBOXO60393 691 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ICMTO60725 284 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 MAFO75444 373 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CCDC159P0C7I6 412 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PCNAP12004 261 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CES1P23141 567 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZFP36L2P47974 494 aaKnown RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 KPNA2P52292 529 aaKnown RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 TPD52P55327 224 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 SH3BP2P78314 561 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 TNFAIP2Q03169 654 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 LAMTOR4Q0VGL1 99 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 NFYCQ13952 458 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CEP78Q5JTW2 689 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ATAD3CQ5T2N8 411 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 SYT6Q5T7P8 510 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ATF7IP2Q5U623 682 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZNF470Q6ECI4 717 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 TUBA3EQ6PEY2 450 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 SPATC1Q76KD6 591 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 FAM83AQ86UY5 434 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CLYBLQ8N0X4 340 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 METTL4Q8N3J2 472 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CELF2-AS1Q8N7Q2 184 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 C7orf31Q8N865 590 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 KIAA1958Q8N8K9 716 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 SPERTQ8NA61 448 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 RNF149Q8NC42 400 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZNF555Q8NEP9 628 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 RPL3LQ92901 407 aaKnown RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZBED3Q96IU2 234 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CYP2S1Q96SQ9 504 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PCYT2Q99447 389 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PIF1Q9H611 641 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 EPS8L2Q9H6S3 715 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ANKHQ9HCJ1 492 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 EXD2Q9NVH0 621 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 UBP1Q9NZI7 540 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 OPTCQ9UBM4 332 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 FBXO5Q9UKT4 447 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 IGKV6D-21A0A0A0MT36 114 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 FAM92AA1XBS5 289 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CCDC154A6NI56 674 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 AGAP5A6NIR3 686 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PPP6CO00743 305 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 DCLK1O15075 740 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 MFN2O95140 757 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 NFKB1P19838 968 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 MTHFRP42898 656 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ACADSBP45954 432 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CDK5R2Q13319 367 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 UNC50Q53HI1 259 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZNF678Q5SXM1 525 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 NOL9Q5SY16 702 aaKnown RBP9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZNF691Q5VV52 312 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 FKBP1CQ5VVH2 108 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 GLYATQ6IB77 296 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 SULT1C3Q6IMI6 304 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 PKN3Q6P5Z2 889 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 ZDHHC13Q8IUH4 622 aa9.34□□□□□ -0.91
NECAP1-201ENST00000339754 CCDC103Q8IW40 242 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms