RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MTX2O75431 263 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 ECI2O75521 394 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 CTSLP07711 333 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 IMPDH1P20839 514 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 CPOXP36551 454 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SLC6A11P48066 632 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 CREB5Q02930 508 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 BTKQ06187 659 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 PRKAA1Q13131 559 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 NFATC2Q13469 925 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 KHDC1Q4VXA5 237 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 CUZD1Q86UP6 607 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 LMNTD2Q8IXW0 634 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 GDPD5Q8WTR4 605 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SMG7Q92540 1137 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 KLHL32Q96NJ5 620 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 CCDC68Q9H2F9 335 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 PIDD1Q9HB75 910 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 FBRSL1Q9HCM7 1045 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 INTS10Q9NVR2 710 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 STK39Q9UEW8 545 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 TAGLN3Q9UI15 199 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 OAS3Q9Y6K5 1087 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SLC30A1Q9Y6M5 507 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 H7C0S8 307 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 LEFTY1O75610 366 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 IGSF6O95976 241 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 AOC1P19801 751 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 TTPAP49638 278 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 CLCN7P51798 805 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 DNAJB13P59910 316 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 LAMB3Q13751 1172 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 DHCR24Q15392 516 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SNCBQ16143 134 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP13A5Q4VNC0 1218 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 ARSIQ5FYB1 569 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 PIWIL4Q7Z3Z4 852 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 LCA5Q86VQ0 697 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 GABPB2Q8TAK5 448 aaPredicted RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 TRPC4APQ8TEL6 797 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SREK1Q8WXA9 508 aaKnown RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SCAMP4Q969E2 229 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 MRGPRX3Q96LB0 322 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 THTPAQ9BU02 230 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 P2RY12Q9H244 342 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 BRD9Q9H8M2 597 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 ZBTB26Q9HCK0 441 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 SEMA4BQ9NPR2 832 aaPredicted RBP7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 PLA2G4CQ9UP65 541 aa7.34□□□□□ -1.23
SRFBP1-201ENST00000339397 MUC3AQ02505 3323 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SUPT3HB4E1H0 165 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 PRRT4C9JH25 899 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 E5RI56 91 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 PLK4O00444 970 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SDHDO14521 159 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 XYLBO75191 536 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SUPT3HO75486 399 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 CDK14O94921 469 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 TRIM16O95361 564 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 CYP17A1P05093 508 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 HLA-EP13747 358 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 GFAPP14136 432 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SERPINA4P29622 427 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 MSX2P35548 267 aaPredicted RBP7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 RASSF2P50749 326 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SNRPD1P62314 119 aaKnown RBP7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 HERVK_113P63132 956 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 KLF10Q13118 480 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 KPNB1Q14974 876 aaKnown RBP7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 CARD16Q5EG05 197 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM78AQ5JUQ0 283 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF648Q5T619 568 aaPredicted RBP7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM91A1Q658Y4 838 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SCIMPQ6UWF3 145 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 FRS2Q8WU20 508 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 DLG3Q92796 817 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 NXPE3Q969Y0 559 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 LINGO1Q96FE5 620 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SCRN2Q96FV2 425 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 CNDP1Q96KN2 507 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 PLEKHG4BQ96PX9 1271 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 ERVK-6Q9BXR3 956 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 PBX4Q9BYU1 374 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 MID2Q9UJV3 735 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF225Q9UK10 706 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 SARDHQ9UL12 918 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 TMPRSS11EQ9UL52 423 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 RNF112Q9ULX5 631 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 TIMM22Q9Y584 194 aa7.34□□□□□ -1.24
SRFBP1-201ENST00000339397 CAPN8A6NHC0 703 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 NPHS1O60500 1241 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 EEF1DP29692 281 aaKnown RBP7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 PGM1P36871 562 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 MXRA7P84157 204 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 B4GALNT1Q00973 533 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 CACNG1Q06432 222 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 UGT3A2Q3SY77 523 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 ACSBG2Q5FVE4 666 aa7.33□□□□□ -1.24
SRFBP1-201ENST00000339397 ARMC3Q5W041 872 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms