RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 FAM58BPP0C7Q3 252 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 PCNAP12004 261 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 MTHFD2P13995 350 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 CAPN3P20807 821 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 TUFMP49411 452 aaKnown RBP9.65□□□□□ -0.87
MSL3-202ENST00000337339 KPNA1P52294 538 aaPredicted RBP9.65□□□□□ -0.87
MSL3-202ENST00000337339 CDH4P55283 916 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 UFM1P61960 85 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 YBX1P67809 324 aaKnown RBP9.65□□□□□ -0.87
MSL3-202ENST00000337339 LAMB3Q13751 1172 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 LRP8Q14114 963 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 VEPH1Q14D04 833 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 OTUD3Q5T2D3 398 aaPredicted RBP9.65□□□□□ -0.87
MSL3-202ENST00000337339 DLG3Q92796 817 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 PPM1MQ96MI6 270 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 SLC29A1Q99808 456 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 CCT7Q99832 543 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 ASB8Q9H765 288 aa9.65□□□□□ -0.87
MSL3-202ENST00000337339 MRPL40Q9NQ50 206 aaKnown RBP9.65□□□□□ -0.87
MSL3-202ENST00000337339 IGLV3-10A0A075B6K4 115 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 C1orf232A0A0U1RR37 186 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 STC2O76061 302 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 S100BP04271 92 aaPredicted RBP9.64□□□□□ -0.87
MSL3-202ENST00000337339 IL10P22301 178 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 GRIA2P42262 883 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 NRG1Q02297 640 aaPredicted RBP9.64□□□□□ -0.87
MSL3-202ENST00000337339 TRAF2Q12933 501 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 HERC3Q15034 1050 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 SLC5A9Q2M3M2 681 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 USP41Q3LFD5 358 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ARMC12Q5T9G4 340 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 PELI3Q8N2H9 469 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 CATSPER1Q8NEC5 780 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ASIC4Q96FT7 647 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 TMEM169Q96HH4 297 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 MAELQ96JY0 434 aaKnown RBP9.64□□□□□ -0.87
MSL3-202ENST00000337339 CASD1Q96PB1 797 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 RANBP9Q96S59 729 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 CIPCQ9C0C6 399 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 TUBB1Q9H4B7 451 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ZFP14Q9HCL3 533 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ASB1Q9Y576 335 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 CCDC154A6NI56 674 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 SYCE1LA8MT33 242 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ARVCFO00192 962 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ACOT8O14734 319 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 SEC24AO95486 1093 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 PAX3P23760 479 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 HMOX2P30519 316 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 SATB1Q01826 763 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ELAVL2Q12926 359 aaKnown RBP9.64□□□□□ -0.87
MSL3-202ENST00000337339 BFSP2Q13515 415 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 MILR1Q7Z6M3 343 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 ZNF786Q8N393 782 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 CDC26Q8NHZ8 85 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 VPS50Q96JG6 964 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 PRICKLE1Q96MT3 831 aaPredicted RBP9.64□□□□□ -0.87
MSL3-202ENST00000337339 SLC22A12Q96S37 553 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 SPATA16Q9BXB7 569 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 CLPBQ9H078 707 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 PFDN4Q9NQP4 134 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 TLR9Q9NR96 1032 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 RIMS3Q9UJD0 308 aa9.64□□□□□ -0.87
MSL3-202ENST00000337339 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 VNN2O95498 520 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 HSPA7P48741 367 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 TTPAP49638 278 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 CDH15P55291 814 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 RHDQ02161 417 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 ADGRF1Q5T601 910 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
MSL3-202ENST00000337339 NPAS4Q8IUM7 802 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 MFN1Q8IWA4 741 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 CBR4Q8N4T8 237 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 ADCY4Q8NFM4 1077 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 FUBP1Q96AE4 644 aaKnown RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 CCDC97Q96F63 343 aaPredicted RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 TEX37Q96LM6 180 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 DEFB118Q96PH6 123 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 TDRD1Q9BXT4 1180 aaKnown RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 GID8Q9NWU2 228 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 CRLS1Q9UJA2 301 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 USP22Q9UPT9 525 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 RALGAPA2Q2PPJ7 1873 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 A0A1B0GVM2 712 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 SLC22A2O15244 555 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 KERAO60938 352 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 CAPN1P07384 714 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 SLC2A4P14672 509 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 ATP6V1B2P21281 511 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 PSMA4P25789 261 aaKnown RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 NFKBIAP25963 317 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 CSRP3P50461 194 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 IRX1P78414 480 aaPredicted RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 ARHGEF7Q14155 803 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 TAF1AQ15573 450 aaPredicted RBP9.63□□□□□ -0.87
MSL3-202ENST00000337339 ATP6AP1LQ52LC2 224 aa9.63□□□□□ -0.87
MSL3-202ENST00000337339 CYHR1Q6ZMK1 362 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms