RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CHST9Q7L1S5 443 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 ITIH5Q86UX2 942 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TTC30BQ8N4P2 665 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 EZH1Q92800 747 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 EIF2B4Q9UI10 523 aaKnown RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 C15orf41Q9Y2V0 281 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 PKP3Q9Y446 797 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TRAF6Q9Y4K3 522 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 SLC30A1Q9Y6M5 507 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TRAV19A0A0A6YYK7 116 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 NPIPB15A6NHN6 443 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TRANK1O15050 2925 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CIB2O75838 187 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 LINC00271P0C7V0 271 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 GRB7Q14451 532 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 ACAP2Q15057 778 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 PLEKHG6Q3KR16 790 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF678Q5SXM1 525 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 AFTPHQ6ULP2 937 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 Q6ZNB5 142 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 ADGRG2Q8IZP9 1017 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 SKA2Q8WVK7 121 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 OVCA2Q8WZ82 227 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 DNMT3BQ9UBC3 853 aaKnown RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CLASP2O75122 1294 aaKnown RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 GPC4O75487 556 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TM7SF2O76062 418 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 COL6A2P12110 1019 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 DPP6P42658 865 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 RALGDSQ12967 914 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 FUT11Q495W5 492 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TCEAL5Q5H9L2 206 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 THEMIS2Q5TEJ8 643 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
LIMK1-201ENST00000336180 GCNAQ96QF7 691 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 LRRC3Q9BY71 257 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CD274Q9NZQ7 290 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 CHD5Q8TDI0 1954 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 VCANP13611 3396 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 SMIM24O75264 130 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF821O75541 412 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 CDK14O94921 469 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 RBP1P09455 135 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 PKMP14618 531 aaKnown RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 HK3P52790 923 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 YBX1P67809 324 aaKnown RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 CHRNA6Q15825 494 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 LY6G5CQ5SRR4 150 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 DPY19L3Q6ZPD9 716 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 SERPINA9Q86WD7 417 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 SFTPA1Q8IWL2 248 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 PIH1D2Q8WWB5 315 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 C1orf50Q9BV19 199 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 C2orf49Q9BVC5 232 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 PLK4O00444 970 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 PIP5K1BO14986 540 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 CRCPO75575 148 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 EPOP01588 193 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ADH1AP07327 375 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 RHOP08100 348 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 VIPR2P41587 438 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 LAMB3Q13751 1172 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 RBBP7Q16576 425 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 PTRHD1Q6GMV3 140 aaKnown RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 CYHR1Q6ZMK1 362 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 FBXO39Q8N4B4 442 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 RDH11Q8TC12 318 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ZFYVE1Q9HBF4 777 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 CASP2P42575 452 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 METAP1P53582 386 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ACVR1Q04771 509 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 DBN1Q16643 649 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 KIF19Q2TAC6 998 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 KBTBD2Q8IY47 623 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ELMOD1Q8N336 334 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 B4GALNT2Q8NHY0 566 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 HMGCLL1Q8TB92 370 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 DDX50Q9BQ39 737 aaKnown RBP12.49□□□□□ -0.41
LIMK1-201ENST00000336180 TUBB6Q9BUF5 446 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 IL17CQ9P0M4 197 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 ZMYM5Q9UJ78 669 aa12.49□□□□□ -0.41
LIMK1-201ENST00000336180 MYO15AQ9UKN7 3530 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 PGLSO95336 258 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 SRCP12931 536 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 CYLC2Q14093 348 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-201ENST00000336180 SGO1Q5FBB7 561 aa12.48□□□□□ -0.41
LIMK1-201ENST00000336180 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms