RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 CDC20Q12834 499 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 DNASE1L3Q13609 305 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 AUHQ13825 339 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 USP10Q14694 798 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 C9orf131Q5VYM1 1079 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 VSTM1Q6UX27 236 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 KCTD8Q6ZWB6 473 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM228AQ86W67 206 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 OR6B3Q8NGW1 331 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 OR2W6PQ8NHA6 318 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 RAB3CQ96E17 227 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CCDC120Q96HB5 630 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SLC9A7Q96T83 725 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 TIMM29Q9BSF4 260 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 NXF2Q9GZY0 626 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 NTN4Q9HB63 628 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PCDH10Q9P2E7 1040 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ACADMP11310 421 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CAV3P56539 151 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 RPS6P62753 249 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 KCNAB1Q14722 419 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ZSWIM7Q19AV6 140 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MOB1BQ7L9L4 216 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ZNF527Q8NB42 609 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CDC42EP4Q9H3Q1 356 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 NUMA1Q14980 2115 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 UBA6A0AVT1 1052 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CLEC3BP05452 202 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 TRIM61Q5EBN2 209 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 TMEM31Q5JXX7 168 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 HACD4Q5VWC8 232 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ASRGL1Q7L266 308 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 C9orf43Q8TAL5 461 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 KERAO60938 352 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 RECQL5O94762 991 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MMP8P22894 467 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 RRP1BQ14684 758 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 OXA1LQ15070 435 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 NSUN6Q8TEA1 469 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ROPN1LQ96C74 230 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PACSIN3Q9UKS6 424 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PCDHGB6Q9Y5F9 930 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PTPRTO14522 1441 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MYL12BO14950 172 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SLC7A4O43246 635 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CSF1RP07333 972 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CD72P21854 359 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 GNALP38405 381 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MTF1Q14872 753 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PXDC1Q5TGL8 231 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 GTF2IRD2BQ6EKJ0 949 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 OTOP3Q7RTS5 596 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 GTF2IRD2Q86UP8 949 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 RASGEF1AQ8N9B8 481 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SLAIN1Q8ND83 568 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 LARP4BQ92615 738 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PCDHA11Q9Y5I1 949 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 TTC37Q6PGP7 1564 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MYH14Q7Z406 1995 aaKnown RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SSX4O60224 188 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CABYRO75952 493 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PGRP06401 933 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PEX2P28328 305 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CDH8P55286 799 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 DMP1Q13316 513 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SUCLG2Q96I99 432 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ASB2Q96Q27 587 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CPXM1Q96SM3 734 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 KLHL11Q9NVR0 708 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MAU2Q9Y6X3 613 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CLTCL1P53675 1640 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 C5orf51A6NDU8 294 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 RPS3P23396 243 aaKnown RBP eCLIP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SLC6A4P31645 630 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 GPC5P78333 572 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PTAR1Q7Z6K3 402 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 OR2L3Q8NG85 312 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PTERQ96BW5 349 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 TTYH2Q9BSA4 534 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 SLC25A13Q9UJS0 675 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 DHRS12A0PJE2 317 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PAPSS1O43252 624 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 TSPAN3O60637 253 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM20BO75063 409 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 PAK4O96013 591 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 MYL12AP19105 171 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ALG11Q2TAA5 492 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 EPHA10Q5JZY3 1008 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CYP4X1Q8N118 509 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 CAMKVQ8NCB2 501 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 DIRAS2Q96HU8 199 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ARMC7Q9H6L4 198 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 ANKEF1Q9NU02 776 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 NKX1-2Q9UD57 310 aaPredicted RBP5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 KIAA1257Q9ULG3 409 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 LYVE1Q9Y5Y7 322 aa5.32□□□□□ -1.56
TNRC6B-202ENST00000335727 POLRMTO00411 1230 aaKnown RBP5.31□□□□□ -1.56
TNRC6B-202ENST00000335727 PITPNM1O00562 1244 aa5.31□□□□□ -1.56
TNRC6B-202ENST00000335727 KLF11O14901 512 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms