RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 TMTC1Q8IUR5 882 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 KRT35Q92764 455 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 P3H4Q92791 437 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
C9orf85-201ENST00000334731 UBL7Q96S82 380 aaPredicted RBP11.11□□□□□ -0.63
C9orf85-201ENST00000334731 SPATA16Q9BXB7 569 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 HEMGNQ9BXL5 484 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 RMI1Q9H9A7 625 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 LUC7LQ9NQ29 371 aaKnown RBP11.11□□□□□ -0.63
C9orf85-201ENST00000334731 UBP1Q9NZI7 540 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 ATXN10Q9UBB4 475 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
C9orf85-201ENST00000334731 ZNF711Q9Y462 761 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 LOXL2Q9Y4K0 774 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 DUSP10Q9Y6W6 482 aa11.11□□□□□ -0.63
C9orf85-201ENST00000334731 SHROOM3Q8TF72 1996 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 IGHV1OR21-1A0A087WYE8 117 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 AGRPO00253 132 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 AURKAO14965 403 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NVLO15381 856 aaKnown RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ZW10O43264 779 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 MTSS1O43312 755 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NUAK1O60285 661 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 SLC25A14O95258 325 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NDUFA10O95299 355 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 EPOP01588 193 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 JMJD7P0C870 316 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ZNF8P17098 575 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 BPIP17213 487 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ITIH1P19827 911 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NFKB1P19838 968 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 FASLGP48023 281 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 UCNP55089 124 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 WNT3AP56704 352 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 TMPRSS3P57727 454 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 DCDC1P59894 354 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 CLN3Q13286 438 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 SQSTM1Q13501 440 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 PPP2R5EQ16537 467 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ZNF648Q5T619 568 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 PHF19Q5T6S3 580 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 BROXQ5VW32 411 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NKAIN2Q5VXU1 208 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ALS2CLQ60I27 953 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 IYDQ6PHW0 289 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 DAAM2Q86T65 1068 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 CCDC50Q8IVM0 306 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ZNF567Q8N184 647 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 SFRP1Q8N474 314 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 TMEM159Q96B96 161 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 HAUS1Q96CS2 278 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 FCRL5Q96RD9 977 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 VAT1Q99536 393 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 CMKLR1Q99788 373 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NUDT22Q9BRQ3 303 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ZSCAN5AQ9BUG6 496 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 GPR63Q9BZJ6 419 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 CARD9Q9H257 536 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 CPNE5Q9HCH3 593 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 TRIM39Q9HCM9 518 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 ARFGAP3Q9NP61 516 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 RAD18Q9NS91 495 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 NFKBIL1Q9UBC1 381 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 TBC1D29Q9UFV1 150 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 PISDQ9UG56 409 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 FAM153AQ9UHL3 310 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 REXO2Q9Y3B8 237 aaKnown RBP11.1□□□□□ -0.63
C9orf85-201ENST00000334731 PCDHA3Q9Y5H8 950 aa11.1□□□□□ -0.63
C9orf85-201ENST00000334731 PTPRQQ9UMZ3 2332 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 IGHV5-10-1A0A0J9YXX1 117 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 TEX51A0A1B0GUA7 166 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 HACD1B0YJ81 288 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ESPNB1AK53 854 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 GRID2O43424 1007 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 SLC4A1P02730 911 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ACP5P13686 325 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ETV5P41161 510 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 TERF1P54274 439 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 CFHR1Q03591 330 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 COL9A2Q14055 689 aaPredicted RBP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 C16orf72Q14CZ0 275 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 NOMO1Q15155 1222 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 SIRPB2Q5JXA9 342 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ARHGAP40Q5TG30 622 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 PDPK2PQ6A1A2 396 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 BBS12Q6ZW61 710 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 PID1Q7Z2X4 250 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ADGRG6Q86SQ4 1221 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 GAS2L3Q86XJ1 694 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 JAMLQ86YT9 394 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms