RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 KCTD14Q9BQ13 255 aaPredicted RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PNPLA3Q9NST1 481 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 OLAHQ9NV23 265 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CNOT11Q9UKZ1 510 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PCDHB7Q9Y5E2 793 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 BBIP1A8MTZ0 92 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 FXYD1O00168 92 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 KERAO60938 352 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 KATNA1O75449 491 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 OR4F21O95013 312 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CYBBP04839 570 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 ITGB6P18564 788 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC6A4P31645 630 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 ACLYP53396 1101 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 OXCT1P55809 520 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 NFKB2Q00653 900 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PAGE3Q5JUK9 113 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 PSAPL1Q6NUJ1 521 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 RALGPS2Q86X27 583 aaPredicted RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CARM1Q86X55 608 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CPNE9Q8IYJ1 553 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 NSMCE3Q96MG7 304 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 STARD7Q9NQZ5 370 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SUN2Q9UH99 717 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 TRMT6Q9UJA5 497 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SH3BP1Q9Y3L3 701 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CROCCQ5TZA2 2017 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CCDC154A6NI56 674 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 C2orf81A6NN90 581 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 ALDH1A1P00352 501 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 FGF4P08620 206 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CKBP12277 381 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 IDO1P14902 403 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 GSK3BP49841 420 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 ATP4BP51164 291 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SH3BGRP55822 239 aaPredicted RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 TXNL4AP83876 142 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 LIPEQ05469 1076 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CMTR2Q8IYT2 770 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 MDGA1Q8NFP4 955 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 EEF1AKMT1Q8WVE0 214 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 LINGO1Q96FE5 620 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 RBM38Q9H0Z9 239 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 OLA1Q9NTK5 396 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 CCM2LQ9NUG4 571 aaPredicted RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SMOXQ9NWM0 555 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 DUS2Q9NX74 493 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 SEPT3Q9UH03 358 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 ASB1Q9Y576 335 aa13.95□□□□□ -0.18
ATP2C1-201ENST00000328560 DRGXA6NNA5 263 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 H3BNH8 94 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 SYNCRIPO60506 623 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 TRMUO75648 421 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 CDH2P19022 906 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 MC4RP32245 332 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 TWF1Q12792 350 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 HACD2Q6Y1H2 254 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 FUBP1Q96AE4 644 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 VPS50Q96JG6 964 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 ALG2Q9H553 416 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 SDR39U1Q9NRG7 319 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 GKN1Q9NS71 199 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 PDE4DIPQ5VU43 2346 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 VPS26AO75436 327 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 OGNP20774 298 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 HOXD10P28358 340 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 C18orf21Q32NC0 220 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 BLOC1S3Q6QNY0 202 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 CAMK1DQ8IU85 385 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 PHYKPLQ8IUZ5 450 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 FIBCD1Q8N539 461 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 MAGEE2Q8TD90 523 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 FBXL20Q96IG2 436 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 STX7O15400 261 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 PYGLP06737 847 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 DSC1Q08554 894 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 PPP4R4Q6NUP7 873 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 GALNT7Q86SF2 657 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 GPSM1Q86YR5 675 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 RHEBL1Q8TAI7 183 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 CLK4Q9HAZ1 481 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 INTS7Q9NVH2 962 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 THEGQ9P2T0 379 aa13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 RSL24D1Q9UHA3 163 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-201ENST00000328560 TDRD15B5MCY1 1934 aaKnown RBP13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 MTMR11A4FU01 709 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 EI24O14681 340 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 SLC22A3O75751 556 aa13.93□□□□□ -0.18
ATP2C1-201ENST00000328560 GJB5O95377 273 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms