RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 DNAJB4Q9UDY4 337 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 AHCYL1O43865 530 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 SNX3O60493 162 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 TACSTD2P09758 323 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 GLRA2P23416 452 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 CTNNB1P35222 781 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 PPP3R1P63098 170 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 TEX44Q53QW1 395 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 MEIOBQ8N635 442 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 TMCO6Q96DC7 493 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 MGME1Q9BQP7 344 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 PLEKHA1Q9HB21 404 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 hCG_1818297A0A087WSY0 165 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 SLC28A2O43868 658 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 TBL1XO60907 577 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 CCNCP24863 283 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 CDK18Q07002 472 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
FN1-201ENST00000323926 FAM183BPQ6ZVS7 135 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 RNF208Q9H0X6 261 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 CAB39LQ9H9S4 337 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 CDH7Q9ULB5 785 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 UBIAD1Q9Y5Z9 338 aa12.56□□□□□ -0.4
FN1-201ENST00000323926 ZFC3H1O60293 1989 aaKnown RBP12.56□□□□□ -0.4
FN1-201ENST00000323926 PHIPQ8WWQ0 1821 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 A0A087X0B3 334 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 KMOO15229 486 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 GNSP15586 552 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 SMIM5Q71RC9 77 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 MCUBQ9NWR8 336 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PAPSS2O95340 614 aaPredicted RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 AP2A1O95782 977 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 CBSLP0DN79 551 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 S100A1P23297 94 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 CBSP35520 551 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 HADHBP55084 474 aaKnown RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 STX12Q86Y82 276 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 TDRPQ86YL5 185 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 TATDN2Q93075 761 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PCDHB16Q9NRJ7 776 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 NID2Q14112 1375 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 NRP2O60462 931 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 STK16O75716 305 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 RHOQP17081 205 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 RBL1P28749 1068 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 EHD1Q9H4M9 534 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 CKAP5Q14008 2032 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 C22orf31O95567 290 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 THRBP10828 461 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 GNAZP19086 355 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 NME5P56597 212 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 TRPV5Q9NQA5 729 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PFDN2Q9UHV9 154 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 SLC45A1Q9Y2W3 748 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PCDHGA2Q9Y5H1 932 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PMM2O15305 246 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 POP4O95707 220 aaKnown RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 SCN1BQ07699 218 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 UNC5AQ6ZN44 842 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 SNX20Q7Z614 316 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 ZC3H7AQ8IWR0 971 aaKnown RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 BTBD9Q96Q07 612 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 LRTM1Q9HBL6 345 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 COL1A1P02452 1464 aaPredicted RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 ALOX15BO15296 676 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PKMP14618 531 aaKnown RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 PGAM4Q8N0Y7 254 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 OR4C6Q8NH72 309 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 SLC25A51Q9H1U9 297 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 UBE2Q2LH0YL09 131 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 TRBC1P01850 177 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 TTC29Q8NA56 475 aaPredicted RBP12.55□□□□□ -0.4
FN1-201ENST00000323926 OR2T34Q8NGX1 318 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 CCDC107Q8WV48 283 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 RHBDL2Q9NX52 303 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 PCDHGA11Q9Y5H2 935 aa12.55□□□□□ -0.4
FN1-201ENST00000323926 LAMP2P13473 410 aa12.54□□□□□ -0.4
FN1-201ENST00000323926 SRSF11Q05519 484 aaKnown RBP12.54□□□□□ -0.4
FN1-201ENST00000323926 CXCL9Q07325 125 aa12.54□□□□□ -0.4
FN1-201ENST00000323926 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
FN1-201ENST00000323926 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
FN1-201ENST00000323926 TMEM17Q86X19 198 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms