RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 BNIPLQ7Z465 357 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC15A3Q8IY34 581 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 EMID1Q96A84 441 aaPredicted RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 TAMM41Q96BW9 452 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC2A13Q96QE2 648 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 SMOQ99835 787 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 A0A1W2PP18 115 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 IQCA1LA6NCM1 817 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 TREHO43280 583 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 ULK1O75385 1050 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 OTCP00480 354 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 RAP2AP10114 183 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 FOXM1Q08050 763 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 PABPC1LQ4VXU2 614 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF678Q5SXM1 525 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 OR4K2Q8NGD2 314 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 BBS2Q9BXC9 721 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 SOX17Q9H6I2 414 aaPredicted RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 TRPV2Q9Y5S1 764 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 BMP2P12643 396 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 PKMP14618 531 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 RHOQP17081 205 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CES1P23141 567 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 SOX6P35712 828 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CHERPQ8IWX8 916 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 SYTL1Q8IYJ3 562 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 METTL25Q8N6Q8 603 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 POC5Q8NA72 575 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 DACT3Q96B18 629 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 HMCESQ96FZ2 354 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 TMEM74Q96NL1 305 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 NUSAP1Q9BXS6 441 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 TRIM8Q9BZR9 551 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 ST3GAL5Q9UNP4 418 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 A0A1W2PQH9 124 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 C7orf72A4D263 438 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 TOR1BO14657 336 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF197O14709 1029 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CYP4B1P13584 511 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 TRIM32Q13049 653 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 ADAMTSL2Q86TH1 951 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 STK40Q8N2I9 435 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 STX19Q8N4C7 294 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 SCAMP5Q8TAC9 235 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 KCNA7Q96RP8 456 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CEP44Q9C0F1 390 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 MFSD1Q9H3U5 465 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 TFB2MQ9H5Q4 396 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 BPIFA1Q9NP55 256 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 GIN1Q9NXP7 522 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 WDR47O94967 919 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 ANGPTL1O95841 491 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 FTH1P02794 183 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 OGFOD2Q6N063 350 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 HACD2Q6Y1H2 254 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CLEC14AQ86T13 490 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 MON1AQ86VX9 555 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 TTC30BQ8N4P2 665 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 PSMG2Q969U7 264 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 OR52E6Q96RD3 313 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 FAM126AQ9BYI3 521 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 REEP1Q9H902 201 aa12.66□□□□□ -0.38
DNMT3A-202ENST00000321117 CITO14578 2027 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 FAM234BA2RU67 622 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 TMEM247A6NEH6 219 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SNAP29O95721 258 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 LPOP22079 712 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ERVK-8P63133 956 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SIM2Q14190 667 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF773Q6PK81 442 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SAPCD2Q86UD0 394 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 C2orf69Q8N8R5 385 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ZBED3Q96IU2 234 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 FAIMQ9NVQ4 179 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 EIF2B4Q9UI10 523 aaKnown RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 LINC00854A0A1B0GVQ3 168 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 ELOVL7A1L3X0 281 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 BCKDKO14874 412 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 CDH1P12830 882 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 KCNE1P15382 129 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 MCCD1P59942 119 aaPredicted RBP12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 RHOAP61586 193 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 SCAPQ12770 1279 aa12.65□□□□□ -0.38
DNMT3A-202ENST00000321117 PAGE2Q7Z2X7 111 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms