RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PENKP01210 267 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 MC4RP32245 332 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 PLA2G4EQ3MJ16 856 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 C8orf82Q6P1X6 216 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 RIN3Q8TB24 985 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ASB2Q96Q27 587 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 SLC2A11Q9BYW1 496 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 NLE1Q9NVX2 485 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 IL37Q9NZH6 218 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 EIF2B4Q9UI10 523 aaKnown RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 PATJQ8NI35 1801 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 INSIG1O15503 277 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ADAM12O43184 909 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 SNX2O60749 519 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 IGLV3-27P01718 113 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ATP5C1P36542 298 aaKnown RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ZNF140P52738 457 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 LAMB3Q13751 1172 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 CYP51A1Q16850 503 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 TIGD2Q4W5G0 525 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 CPNE9Q8IYJ1 553 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 PAF1Q8N7H5 531 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 MUC3BQ9H195 1237 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 GID8Q9NWU2 228 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 AGO1Q9UL18 857 aaKnown RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 SQORQ9Y6N5 450 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 E5RI56 91 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 PRLP01236 227 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 CAPNS1P04632 268 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 IL10P22301 178 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ATP4BP51164 291 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 KCNK10P57789 538 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 TWF1Q12792 350 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 BIRC2Q13490 618 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 C18orf21Q32NC0 220 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 PAGE3Q5JUK9 113 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 LINGO1Q96FE5 620 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 GLT1D1Q96MS3 346 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 HOPXQ9BPY8 73 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 GPATCH1Q9BRR8 931 aaKnown RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 DERL2Q9GZP9 239 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 LIN28AQ9H9Z2 209 aaKnown RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 SDR39U1Q9NRG7 319 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 TRMT6Q9UJA5 497 aaKnown RBP17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ZNF225Q9UK10 706 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 RAI2Q9Y5P3 530 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 FAM92AA1XBS5 289 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 LCHNA4D1U4 455 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 TMEM88BA6NKF7 163 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 GOLGA8CPA6NN73 597 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 OR4F21O95013 312 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 CYBBP04839 570 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 ITGB6P18564 788 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 PCSK6P29122 969 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SLC11A1P49279 550 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SUOXP51687 545 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 NR1H2P55055 460 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 C11orf91Q3C1V1 193 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 AFTPHQ6ULP2 937 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 HACD2Q6Y1H2 254 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 B3GNT6Q6ZMB0 384 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 PSKH2Q96QS6 385 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SEPHS2Q99611 448 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 MGME1Q9BQP7 344 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SMPD4Q9NXE4 827 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 CNOT11Q9UKZ1 510 aaKnown RBP17.28■□□□□ 0.36
COL9A1-201ENST00000320755 VWA8A3KMH1 1905 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 OR6C75A6NL08 312 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SLC38A8A6NNN8 435 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 BBIP1A8MTZ0 92 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 ARPC2O15144 300 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 STX7O15400 261 aaKnown RBP17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SNAP91O60641 907 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 RHOCP08134 193 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 IDO1P14902 403 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 ATF6P18850 670 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 PSMA4P25789 261 aaKnown RBP17.28■□□□□ 0.36
COL9A1-201ENST00000320755 SLC11A2P49281 568 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 GPR17Q13304 367 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 TYSND1Q2T9J0 566 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 FAM26DQ5JW98 314 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 BLOC1S3Q6QNY0 202 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 OR52B6Q8NGF0 335 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 BIRC8Q96P09 236 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 TCF12Q99081 682 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 MAGEH1Q9H213 219 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 INTS10Q9NVR2 710 aaKnown RBP17.28■□□□□ 0.36
COL9A1-201ENST00000320755 DNMT3LQ9UJW3 386 aa17.28■□□□□ 0.36
COL9A1-201ENST00000320755 TMEM189-UBE2V1I3L0A0 370 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 VPS26AO75436 327 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 KATNA1O75449 491 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 H6PDO95479 791 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 INHBEP58166 350 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 RING1Q06587 406 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 INPP5AQ14642 412 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 ERMP1Q7Z2K6 904 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 RNF180Q86T96 592 aa17.27■□□□□ 0.36
COL9A1-201ENST00000320755 GPSM1Q86YR5 675 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms