RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 KCTD4Q8WVF5 259 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 LRCH3Q96II8 777 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 SCYL1Q96KG9 808 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 KLHL32Q96NJ5 620 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 MTG2Q9H4K7 406 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 SUDS3Q9H7L9 328 aaPredicted RBP12.58□□□□□ -0.39
PTPN6-201ENST00000318974 POLR3BQ9NW08 1133 aaPredicted RBP12.58□□□□□ -0.39
PTPN6-201ENST00000318974 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 PPIL1Q9Y3C6 166 aa12.58□□□□□ -0.39
PTPN6-201ENST00000318974 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 A0A087X1B8 175 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 A0A088AWK7 358 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 CAPN8A6NHC0 703 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 MATN2O00339 956 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 HDAC3O15379 428 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 SNUPNO95149 360 aaKnown RBP12.58□□□□□ -0.4
PTPN6-201ENST00000318974 KAT7O95251 611 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 HNF1BP35680 557 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 GRIA2P42262 883 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 RPL14P50914 215 aaKnown RBP12.58□□□□□ -0.4
PTPN6-201ENST00000318974 POU4F1Q01851 419 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 AFTPHQ6ULP2 937 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 ZNF366Q8N895 744 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 OR4L1Q8NH43 312 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 GRIN3AQ8TCU5 1115 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 CSGALNACT1Q8TDX6 532 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 CHFRQ96EP1 664 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 PANX3Q96QZ0 392 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 OSBPL1AQ9BXW6 950 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 ZFYVE1Q9HBF4 777 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 GPAMQ9HCL2 828 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 TCF7L2Q9NQB0 619 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 IL17CQ9P0M4 197 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 VTI1BQ9UEU0 232 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 IL36AQ9UHA7 158 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 PKP3Q9Y446 797 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 WASF2Q9Y6W5 498 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 LAMA3Q16787 3333 aa12.58□□□□□ -0.4
PTPN6-201ENST00000318974 LEFTY1O75610 366 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 APODP05090 189 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 BMP1P13497 986 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 KCNA5P22460 613 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 HMGCLP35914 325 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SESN3P58005 492 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 POLR2LP62875 67 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 ZNF234Q14588 700 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 NAA25Q14CX7 972 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SLC9B1Q4ZJI4 515 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SEL1L3Q68CR1 1132 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 USP45Q70EL2 814 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 GALNT7Q86SF2 657 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MYLK4Q86YV6 388 aaPredicted RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 CILP2Q8IUL8 1156 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 GPR150Q8NGU9 434 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SCRN2Q96FV2 425 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 CLPTM1LQ96KA5 538 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 LYSMD1Q96S90 227 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 BPIFA1Q9NP55 256 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 CATSPERZQ9NTU4 200 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 NMRK1Q9NWW6 199 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 PRRC2BQ5JSZ5 2229 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 C1orf232A0A0U1RR37 186 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 EDDM13A0A1B0GTR0 161 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MEI4A8MW99 385 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 CD3EAPO15446 510 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MBTPS2O43462 519 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 DCXO43602 365 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 CCNT2O60583 730 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 OGNP20774 298 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 AP2B1P63010 937 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SLC25A3Q00325 362 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 COL4A3Q01955 1670 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 BTKQ06187 659 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 HNRNPA1L2Q32P51 320 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 BRAT1Q6PJG6 821 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 TPRG1Q6ZUI0 275 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 CEP97Q8IW35 865 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 SFTPA1Q8IWL2 248 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 PPFIBP2Q8ND30 876 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MAPK15Q8TD08 544 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 ACTRT2Q8TDY3 377 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 GPR78Q96P69 363 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 C19orf43Q9BQ61 176 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MRPL57Q9BQC6 102 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MRPL46Q9H2W6 279 aaKnown RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 MARCH4Q9P2E8 410 aaPredicted RBP12.57□□□□□ -0.4
PTPN6-201ENST00000318974 XPR1Q9UBH6 696 aa12.57□□□□□ -0.4
PTPN6-201ENST00000318974 A0A0U1RQS6 177 aa12.56□□□□□ -0.4
PTPN6-201ENST00000318974 C2CD4DB7Z1M9 353 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms