RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 OR2AG2A6NM03 316 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 TSHRP16473 764 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 OXTRP30559 389 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 MAGEA9P43362 315 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 ZNF460Q14592 562 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 RBM20Q5T481 1227 aaKnown RBP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 KIAA0895LQ68EN5 471 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 PNCKQ6P2M8 343 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 NXPE1Q8N323 547 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 TRAM1L1Q8N609 369 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 BEND7Q8N7W2 519 aaPredicted RBP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 CALML6Q8TD86 181 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC44A1Q8WWI5 657 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 SERAC1Q96JX3 654 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 PRMT8Q9NR22 394 aaPredicted RBP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 MOSPD1Q9UJG1 213 aa15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.03
PDLIM5-202ENST00000318007 MEI4A8MW99 385 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 GOLGA8RI6L899 631 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 AGPSO00116 658 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 ASMTLO95671 621 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 S1PR4O95977 384 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 IGLV3-19P01714 112 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 PTGER3P43115 390 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 POLD2P49005 469 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 DCDC1P59894 354 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 CYP2U1Q7Z449 544 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC26A11Q86WA9 606 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 RGL4Q8IZJ4 473 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 CENPTQ96BT3 561 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 SGF29Q96ES7 293 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 PSMC3IPQ9P2W1 217 aaPredicted RBP15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 MTO1Q9Y2Z2 717 aaKnown RBP15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 OAS3Q9Y6K5 1087 aaKnown RBP15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 PRSS21Q9Y6M0 314 aa15.26■□□□□ 0.03
PDLIM5-202ENST00000318007 GP5P40197 560 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CD151P48509 253 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 TTPAP49638 278 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 LPAL2Q16609 132 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 PLA2G4EQ3MJ16 856 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 SPDYCQ5MJ68 293 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 PIM3Q86V86 326 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 TRIM69Q86WT6 500 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC41A1Q8IVJ1 513 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CNTN4Q8IWV2 1026 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 NRSN1Q8IZ57 195 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 GLYATL1Q969I3 302 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 VPS39Q96JC1 886 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 ELMO2Q96JJ3 720 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC6A18Q96N87 628 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 COPS8Q99627 209 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CPNE1Q99829 537 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 IER2Q9BTL4 223 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 UNKQ9C0B0 810 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 WDR26Q9H7D7 661 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 AASDHPPTQ9NRN7 309 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC39A10Q9ULF5 831 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 PLXNB3Q9ULL4 1909 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 DNAJC6O75061 913 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 IVLP07476 585 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 KRT15P19012 456 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 HNRNPA2B1P22626 353 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CSE1LP55060 971 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CDK3Q00526 305 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 B4GALNT1Q00973 533 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 ANGPT1Q15389 498 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 NEK5Q6P3R8 708 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 ZC3HC1Q86WB0 502 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 PHYKPLQ8IUZ5 450 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 KRT222Q8N1A0 295 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 BTN2A2Q8WVV5 523 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 RBBP8Q99708 897 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 OR2AG1Q9H205 316 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 MRPL40Q9NQ50 206 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CNOT6Q9ULM6 557 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 CUL9Q8IWT3 2517 aa15.25■□□□□ 0.03
PDLIM5-202ENST00000318007 HMX2A2RU54 273 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 MAP2K7O14733 419 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 NIPSNAP2O75323 286 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 ITGA2BP08514 1039 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 TDGF1P13385 188 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 MSH3P20585 1137 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 PSMA3P25788 255 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 PBLDP30039 288 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 CREB5Q02930 508 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 TYSND1Q2T9J0 566 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 AARS2Q5JTZ9 985 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 CRTC3Q6UUV7 619 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 LPGAT1Q92604 370 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 C1QTNF7Q9BXJ2 289 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 RAD18Q9NS91 495 aa15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 PCYT1BQ9Y5K3 369 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-202ENST00000318007 FAM95CA0A1B0GW59 222 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms