RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 C19orf57Q0VDD7 668 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 ALS2CLQ60I27 953 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 IYDQ6PHW0 289 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 INO80CQ6PI98 192 aaPredicted RBP17.58■□□□□ 0.4
TPM1-203ENST00000317516 B4GALNT4Q76KP1 1039 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 PID1Q7Z2X4 250 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 TMPRSS9Q7Z410 1059 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 SLC9B2Q86UD5 537 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 PHYKPLQ8IUZ5 450 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 TRAM1L1Q8N609 369 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 AVL9Q8NBF6 648 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 OR10G6Q8NH81 332 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 EID2BQ96D98 161 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 WBP1Q96G27 269 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 FERMT1Q9BQL6 677 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 HERPUD2Q9BSE4 406 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 TRABDQ9H4I3 376 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 NFKBIL1Q9UBC1 381 aaPredicted RBP17.58■□□□□ 0.4
TPM1-203ENST00000317516 PRKAB1Q9Y478 270 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 PCDHB11Q9Y5F2 797 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 LRP4O75096 1905 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 IGHV5-10-1A0A0J9YXX1 117 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 HACD1B0YJ81 288 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 AGRPO00253 132 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 SLC4A1P02730 911 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 LIPCP11150 499 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 ACP5P13686 325 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 CD82P27701 267 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 CSTF2P33240 577 aaKnown RBP eCLIP17.57■□□□□ 0.4
TPM1-203ENST00000317516 HHEXQ03014 270 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 LLGL1Q15334 1064 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 ZDHHC20Q5W0Z9 365 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 C11orf63Q6NUN7 778 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 TMEM71Q6P5X7 295 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 ZNF574Q6ZN55 896 aaPredicted RBP17.57■□□□□ 0.4
TPM1-203ENST00000317516 DAAM2Q86T65 1068 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 ZC3H18Q86VM9 953 aaKnown RBP17.57■□□□□ 0.4
TPM1-203ENST00000317516 GPR26Q8NDV2 337 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 CCDC112Q8NEF3 446 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 SLC37A2Q8TED4 501 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 USP7Q93009 1102 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 GLYATL1Q969I3 302 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 PANX2Q96RD6 677 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.57■□□□□ 0.4
TPM1-203ENST00000317516 ZMYND15Q9H091 742 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 OR2AG1Q9H205 316 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 SARS2Q9NP81 518 aaKnown RBP17.57■□□□□ 0.4
TPM1-203ENST00000317516 UBP1Q9NZI7 540 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 KLHL8Q9P2G9 620 aaPredicted RBP17.57■□□□□ 0.4
TPM1-203ENST00000317516 ATXN10Q9UBB4 475 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 TBC1D29Q9UFV1 150 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 TRHDEQ9UKU6 1024 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 KCNK6Q9Y257 313 aa17.57■□□□□ 0.4
TPM1-203ENST00000317516 hCG_1818297A0A087WSY0 165 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 KIR2DS5A0A0G2JLQ3 304 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 A0A0G2JNG1 304 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 KIR2DS3K7RE56 304 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 DUX1O43812 170 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 SNX2O60749 519 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 PECAM1P16284 738 aaPredicted RBP17.56■□□□□ 0.4
TPM1-203ENST00000317516 ZNF8P17098 575 aaPredicted RBP17.56■□□□□ 0.4
TPM1-203ENST00000317516 CLCNKAP51800 687 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 NAP1L1P55209 391 aaKnown RBP17.56■□□□□ 0.4
TPM1-203ENST00000317516 WNT3AP56704 352 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 COPS2P61201 443 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 KIR2DS5Q14953 304 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 C16orf72Q14CZ0 275 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 CCDC181Q5TID7 509 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 NKAIN2Q5VXU1 208 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 TMTC1Q8IUR5 882 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 AGBL5Q8NDL9 886 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 HTR3CQ8WXA8 447 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 CCDC74BQ96LY2 380 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 GOLPH3Q9H4A6 298 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.56■□□□□ 0.4
TPM1-203ENST00000317516 EPN1Q9Y6I3 576 aaPredicted RBP17.56■□□□□ 0.4
TPM1-203ENST00000317516 UNC13CQ8NB66 2214 aa17.56■□□□□ 0.4
TPM1-203ENST00000317516 PRAMEF33A0A0G2JMD5 474 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 KMOO15229 486 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 VEGFDO43915 354 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 PRAMEF10O60809 474 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 F3P13726 295 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 BPIP17213 487 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 NFKB1P19838 968 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 HMGCLP35914 325 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 XRCC4Q13426 336 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 PPP2R5EQ16537 467 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.55■□□□□ 0.4
TPM1-203ENST00000317516 FAM182AQ5T1J6 154 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 RCBTB1Q8NDN9 531 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 MRFAP1L1Q96HT8 127 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 PLEKHG4BQ96PX9 1271 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 FCRL5Q96RD9 977 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 TAAR9Q96RI9 348 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 HACD3Q9P035 362 aa17.55■□□□□ 0.4
TPM1-203ENST00000317516 COL27A1Q8IZC6 1860 aaPredicted RBP17.54■□□□□ 0.4
TPM1-203ENST00000317516 FASNP49327 2511 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms