RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TFPIP10646 304 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ANXA7P20073 488 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PTMSP20962 102 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TACR2P21452 398 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 HOXD9P28356 352 aaPredicted RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 EPHB2P29323 1055 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 NUCB2P80303 420 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 HSF1Q00613 529 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ARHGEF6Q15052 776 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PLCB4Q15147 1175 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 DLG2Q15700 870 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 CCDC158Q5M9N0 1113 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TTC39AQ5SRH9 613 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 DNAJB7Q7Z6W7 309 aaPredicted RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 VSIG1Q86XK7 387 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 DENND6AQ8IWF6 608 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 BOLLQ8N9W6 283 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 DPF1Q92782 380 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SNAPC3Q92966 411 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PGAP3Q96FM1 320 aaPredicted RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 CLMNQ96JQ2 1002 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 FIZ1Q96SL8 496 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TEX12Q9BXU0 123 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 POLDIP3Q9BY77 421 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 B3GNT4Q9C0J1 378 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 CDT1Q9H211 546 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 R3HDMLQ9H3Y0 253 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 CISD1Q9NZ45 108 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 MSRB1Q9NZV6 116 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SEC63Q9UGP8 760 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TRMT112Q9UI30 125 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 AGO2Q9UKV8 859 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 NWD2Q9ULI1 1742 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TOGARAM1Q9Y4F4 1720 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SCAMP1O15126 338 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 RPN1P04843 607 aaKnown RBP4.09□□□□□ -1.75
SMCO3-201ENST00000316048 LCKP06239 509 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 CYC1P08574 325 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MMP9P14780 707 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 GPTP24298 496 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 KCNJ4P48050 445 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 COMPP49747 757 aaPredicted RBP4.09□□□□□ -1.75
SMCO3-201ENST00000316048 ZNF91Q05481 1191 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 ACSM2AQ08AH3 577 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 NAE1Q13564 534 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 PSMD6Q15008 389 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 HLFQ16534 295 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MMEL1Q495T6 779 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 PARP10Q53GL7 1025 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 IGSF11Q5DX21 431 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 PIK3CD-AS1Q5SR53 167 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 C6orf10Q5SRN2 563 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 KIAA1614Q5VZ46 1190 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 ACSM2BQ68CK6 577 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 ANKRD54Q6NXT1 300 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MIS18BP1Q6P0N0 1132 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 ATG9AQ7Z3C6 839 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MRGPRGQ86SM5 289 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 DNAAF5Q86Y56 855 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 ZNF34Q8IZ26 560 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 AVL9Q8NBF6 648 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 VPS33AQ96AX1 596 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 FBXL8Q96CD0 374 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MSI2Q96DH6 328 aaKnown RBP4.09□□□□□ -1.75
SMCO3-201ENST00000316048 TMEM47Q9BQJ4 181 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 LSG1Q9H089 658 aaKnown RBP4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MAP6D1Q9H9H5 199 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 MORF4L1Q9UBU8 362 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 DBNLQ9UJU6 430 aaKnown RBP4.09□□□□□ -1.75
SMCO3-201ENST00000316048 NUP188Q5SRE5 1749 aa4.09□□□□□ -1.75
SMCO3-201ENST00000316048 hCG_1809904A0A1W2PP81 198 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 A0A1W2PPE2 198 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 A0A1W2PR64 198 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 C17orf102A2RUQ5 167 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 WIPF3A6NGB9 483 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 F8W810 466 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 VCYO14598 125 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 ATP2A1O14983 1001 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 C22orf31O95567 290 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 TRIM21P19474 475 aaKnown RBP4.09□□□□□ -1.76
SMCO3-201ENST00000316048 ATP5F1P24539 256 aaPredicted RBP4.09□□□□□ -1.76
SMCO3-201ENST00000316048 PSMA5P28066 241 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 CRKLP46109 303 aaKnown RBP4.09□□□□□ -1.76
SMCO3-201ENST00000316048 GPR12P47775 334 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 TIMM10P62072 90 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 ECT2LQ008S8 904 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 LPIN1Q14693 890 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 NAB2Q15742 525 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 ISM2Q6H9L7 571 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 TMC8Q8IU68 726 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 GALNT13Q8IUC8 556 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 CEP97Q8IW35 865 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 APPL2Q8NEU8 664 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 SEMA6DQ8NFY4 1073 aa4.09□□□□□ -1.76
SMCO3-201ENST00000316048 OR6J1Q8NGC5 347 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms