RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PLD4Q96BZ4 506 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TSNARE1Q96NA8 513 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 SLC30A3Q99726 388 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MGME1Q9BQP7 344 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 MCMBPQ9BTE3 642 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DCUN1D5Q9BTE7 237 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TCF7L2Q9NQB0 619 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ASAH2Q9NR71 780 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 DNMT3BQ9UBC3 853 aaKnown RBP7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ZDHHC2Q9UIJ5 367 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 TBC1D30Q9Y2I9 924 aa7.58□□□□□ -1.2
TRIM55-202ENST00000315962 ILVBLA1L0T0 632 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 RFXAPO00287 272 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 KIAA0355O15063 1070 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TRIM13O60858 407 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 RHOP08100 348 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 PBX2P40425 430 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 VIPR2P41587 438 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 FAM91A1Q658Y4 838 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CLEC6AQ6EIG7 209 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 ASTLQ6HA08 431 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 LRRC8EQ6NSJ5 796 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TSPAN33Q86UF1 283 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 KBTBD6Q86V97 674 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TMC8Q8IU68 726 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 BBS5Q8N3I7 341 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 MRPL43Q8N983 215 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 BRSK1Q8TDC3 778 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CMTM5Q96DZ9 223 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CDK5RAP1Q96SZ6 601 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 HERC2P3Q9BVR0 1158 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TDRD1Q9BXT4 1180 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 SEZ6LQ9BYH1 1024 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 POMKQ9H5K3 350 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 IGFLR1Q9H665 355 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CAAP1Q9H8G2 361 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 IL1RL2Q9HB29 575 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 ARNT2Q9HBZ2 717 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 POLR3BQ9NW08 1133 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CD84Q9UIB8 345 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 PTGDR2Q9Y5Y4 395 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 COMMD3-BMI1R4GMX3 469 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 WDFY4Q6ZS81 3184 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TYW5A2RUC4 315 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 H3BMM5 538 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 PLOD2O00469 737 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 NIPSNAP2O75323 286 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CLDN7O95471 211 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 NDST3O95803 873 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CLIC3O95833 236 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 HSPA1AP0DMV8 641 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 HSPA1BP0DMV9 641 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TFEBP19484 476 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 SLC5A2P31639 672 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 STT3AP46977 705 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 MTTPP55157 894 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 NSUN2Q08J23 767 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 MAP7Q14244 749 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 PABPC1LQ4VXU2 614 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 KIAA0930Q6ICG6 404 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 CLEC14AQ86T13 490 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 ITIH5Q86UX2 942 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 ACMSDQ8TDX5 336 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 ARMC5Q96C12 935 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 TRMT2BQ96GJ1 504 aaKnown RBP7.57□□□□□ -1.2
TRIM55-202ENST00000315962 GPR78Q96P69 363 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 BBS2Q9BXC9 721 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 GPR63Q9BZJ6 419 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 C1orf21Q9H246 121 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 GTSE1Q9NYZ3 720 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 ATXN10Q9UBB4 475 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 MICAL3Q7RTP6 2002 aa7.57□□□□□ -1.2
TRIM55-202ENST00000315962 A0A1B0GTL3 188 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 KRT87PA6NCN2 255 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 BIRC5O15392 142 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 RNASEH2AO75792 299 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CKMT2P17540 419 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CHRM3P20309 590 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 MC4RP32245 332 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 PPM1AP35813 382 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 BMPR1AP36894 532 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 PTPRNQ16849 979 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 PFKFB4Q16877 469 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 IL23RQ5VWK5 629 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 PAQR3Q6TCH7 311 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 TRIM67Q6ZTA4 783 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 ADGRD2Q7Z7M1 963 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SETD3Q86TU7 594 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 ZSWIM9Q86XI8 627 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SFTPA1Q8IWL2 248 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 ELMOD1Q8N336 334 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SIDT2Q8NBJ9 832 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 ITFG1Q8TB96 612 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 RAB3IL1Q8TBN0 382 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 PTERQ96BW5 349 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 NSUN5Q96P11 429 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LRRC3BQ96PB8 259 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 TRIB3Q96RU7 358 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CIB1Q99828 191 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms