RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 MPSTP25325 297 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 SPIBQ01892 262 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 ACAP2Q15057 778 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 NPY5RQ15761 445 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 ADGRD1Q6QNK2 874 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 CRELD2Q6UXH1 353 aaPredicted RBP11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 AMER2Q8N7J2 671 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 LEMD2Q8NC56 503 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 ENKURQ8TC29 256 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 PSMG2Q969U7 264 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 ACDQ96AP0 544 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 SH3GL2Q99962 352 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 RTKNQ9BST9 563 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 IPPKQ9H8X2 491 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 EIF2B3Q9NR50 452 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 NFKBIL1Q9UBC1 381 aaPredicted RBP11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 SUCOQ9UBS9 1254 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 FZD10Q9ULW2 581 aa11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 SAMD4AQ9UPU9 718 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-201ENST00000314845 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 SCN2BO60939 215 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 WBP4O75554 376 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 CD48P09326 243 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ITGAXP20702 1163 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 GPD2P43304 727 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 LCP2Q13094 533 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ZIK1Q3SY52 487 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 TTYH3Q9C0H2 523 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 FAM192AQ9GZU8 254 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 CCDC177Q9NQR7 707 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 IGSF9Q9P2J2 1179 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 IRAK2O43187 625 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 MGRN1O60291 552 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 KRT33AO76009 404 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 COL6A1P12109 1028 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 CYP4F2P78329 520 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 KLF10Q13118 480 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 NR1D2Q14995 579 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ALYREFQ86V81 257 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 TBC1D21Q8IYX1 336 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 PCDH19Q8TAB3 1148 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 TEX47Q8TBZ9 253 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ABCG8Q9H221 673 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 DDX18Q9NVP1 670 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 TSC22D4Q9Y3Q8 395 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 CMPK1P30085 196 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ASPAP45381 313 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ARHGAP8P85298 464 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 CFAP206Q8IYR0 622 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 RAD51AP1Q96B01 352 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 C7orf26Q96N11 449 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 LOC100506127A0A0U1RQW1 187 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 KPNA4O00629 521 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 IL6P05231 212 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 CHRNB2P17787 502 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 SPIRE1Q08AE8 756 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 TAB1Q15750 504 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 SERPINA9Q86WD7 417 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 DAW1Q8N136 415 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 MPP5Q8N3R9 675 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 ARNTL2Q8WYA1 636 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 SCLYQ96I15 445 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 WRAP53Q9BUR4 548 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 TMEM109Q9BVC6 243 aa11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 FCF1Q9Y324 198 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-201ENST00000314845 OR2AG2A6NM03 316 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 MT-CYBP00156 380 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 UNGP13051 313 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 NSG1P42857 185 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 CHN2P52757 468 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 DPYSL2Q16555 572 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 CCL14Q16627 93 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 PLA2G4EQ3MJ16 856 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 ESRP1Q6NXG1 681 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 MZT2AQ6P582 158 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 TAF8Q7Z7C8 310 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 CRYBG2Q8N1P7 616 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 ATG10Q9H0Y0 220 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 POLMQ9NP87 494 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 CCNB1IP1Q9NPC3 277 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 A0A0U1RQF3 1178 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 NRP1O14786 923 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 RASGRP1O95267 797 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 ITPKBP27987 946 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 MPP1Q00013 466 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 NDUFAF6Q330K2 333 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 SNAP47Q5SQN1 464 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 DEF8Q6ZN54 512 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 IZUMO1Q8IYV9 350 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 FLCNQ8NFG4 579 aa11.88□□□□□ -0.51
AMBRA1-201ENST00000314845 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms