RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 MT-ND3P03897 115 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 GSTA2P09210 222 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SMIM18P0DKX4 95 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 EZRP15311 586 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 TYRP1P17643 537 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 CD53P19397 219 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 AK4P27144 223 aaPredicted RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 CRABP2P29373 138 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 MC4RP32245 332 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PLXNA3P51805 1871 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 CDH4P55283 916 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 KRT72Q14CN4 511 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 RBM20Q5T481 1227 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 DUS1LQ6P1R4 473 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 MBOAT1Q6ZNC8 495 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ZSWIM9Q86XI8 627 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PLD3Q8IV08 490 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PPIL6Q8IXY8 311 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PPFIBP2Q8ND30 876 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 TSTD1Q8NFU3 115 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 RTP4Q96DX8 246 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 NAF1Q96HR8 494 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 FEM1CQ96JP0 617 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SLC45A3Q96JT2 553 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 TEKT5Q96M29 485 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 FCRL3Q96P31 734 aaPredicted RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 DDX50Q9BQ39 737 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 TBL1YQ9BQ87 522 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 TBC1D10AQ9BXI6 508 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 OR2AG1Q9H205 316 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PNPLA8Q9NP80 782 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PATE3B3GLJ2 98 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ALOX15BO15296 676 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 CDK14O94921 469 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 IGSF6O95976 241 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ACP5P13686 325 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 BRAFP15056 766 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SERPINB3P29508 390 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SERPINA4P29622 427 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ALDH4A1P30038 563 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 HNF1BP35680 557 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 CASP2P42575 452 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 GDF5P43026 501 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 GPR1P46091 355 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SNRPD1P62314 119 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 TBL3Q12788 808 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 MSLNQ13421 630 aaPredicted RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 KHDC1Q4VXA5 237 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 SETMARQ53H47 684 aaPredicted RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 PGM2L1Q6PCE3 622 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 NCEH1Q6PIU2 408 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 TMEM92Q6UXU6 159 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 OTOAQ7RTW8 1153 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PIANPQ8IYJ0 282 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ALDH16A1Q8IZ83 802 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 FBXO27Q8NI29 283 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 PPP4R1Q8TF05 950 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 NKD2Q969F2 451 aaPredicted RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 AP2M1Q96CW1 435 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ANAPC16Q96DE5 110 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SLC39A13Q96H72 371 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 FAM111AQ96PZ2 611 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 MACROD1Q9BQ69 325 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 C20orf27Q9GZN8 174 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 ZNF385DQ9H6B1 395 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 SAR1AQ9NR31 198 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 FNIP2Q9P278 1114 aa4.92□□□□□ -1.62
CAST-201ENST00000309190 MBD1Q9UIS9 605 aaPredicted RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 HBS1LQ9Y450 684 aaKnown RBP4.92□□□□□ -1.62
CAST-201ENST00000309190 TCRBV9S1A1TA0A576 114 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 CCDC162PA2VCL2 907 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 POM121BA6NF01 834 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 LRRC14BA6NHZ5 514 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 H3BNX3 289 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 CASQ2O14958 399 aaPredicted RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 RNASEH1O60930 286 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 SKAP2O75563 359 aaPredicted RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 SRP72O76094 671 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 RHOBTB1O94844 696 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 EFNA1P20827 205 aaPredicted RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 STIP1P31948 543 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 ARRB2P32121 409 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 PTDSS1P48651 473 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 SERPINH1P50454 418 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 THOP1P52888 689 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 RPL6Q02878 288 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 DMWDQ09019 674 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 DPYSQ14117 519 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 CYTH1Q15438 398 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 ACSBG2Q5FVE4 666 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 FYB2Q5VWT5 728 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 PDE12Q6L8Q7 609 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 C22orf39Q6P5X5 142 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 ZNF534Q76KX8 674 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 CROCCP2Q86T23 111 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 PSTKQ8IV42 348 aaKnown RBP4.91□□□□□ -1.62
CAST-201ENST00000309190 SMRP1Q8NCR6 262 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 OR2AP1Q8NGE2 309 aa4.91□□□□□ -1.62
CAST-201ENST00000309190 CCL4L1Q8NHW4 92 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms