RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 UGP2Q16851 508 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 MTX3Q5HYI7 312 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 ITPRIPL1Q6GPH6 555 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 KDELC2Q7Z4H8 507 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 ITIH5Q86UX2 942 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 GPR180Q86V85 440 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF354CQ86Y25 554 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 CNTN4Q8IWV2 1026 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 ARHGAP12Q8IWW6 846 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 PCDH20Q8N6Y1 951 aaKnown RBP10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 TNIP2Q8NFZ5 429 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 CLIP3Q96DZ5 547 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF419Q96HQ0 510 aaPredicted RBP10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 MLPHQ9BV36 600 aaPredicted RBP10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 KIFC1Q9BW19 673 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 RNF38Q9H0F5 515 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 PCDHAC1Q9H158 963 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 SPAG4Q9NPE6 437 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 IL23AQ9NPF7 189 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 CHRAC1Q9NRG0 131 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 AFF4Q9UHB7 1163 aaKnown RBP10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 CNOT6Q9ULM6 557 aaKnown RBP10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 ACOT9Q9Y305 439 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 IFT52Q9Y366 437 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 SNX13Q9Y5W8 968 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 BACE2Q9Y5Z0 518 aa10.28□□□□□ -0.76
APOBEC3F-201ENST00000308521 SPTBN5Q9NRC6 3674 aaKnown RBP10.27□□□□□ -0.76
APOBEC3F-201ENST00000308521 C2orf78A6NCI8 922 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 PSMD3O43242 534 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 FGF18O76093 207 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ABLIM3O94929 683 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 F7P08709 466 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 CD68P34810 354 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 TSTD2Q5T7W7 516 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 FBXL22Q6P050 247 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ZBTB49Q6ZSB9 765 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 KLHDC8BQ8IXV7 354 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 C7orf61Q8IZ16 206 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 AFAP1L2Q8N4X5 818 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 HMGCLL1Q8TB92 370 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 GRIN3AQ8TCU5 1115 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ZUFSPQ96AP4 578 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 TCF12Q99081 682 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 VAT1Q99536 393 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MEAF6Q9HAF1 191 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ACSS2Q9NR19 701 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 NCKIPSDQ9NZQ3 722 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 XPR1Q9UBH6 696 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 PRKAG2Q9UGJ0 569 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 RABL2BQ9UNT1 228 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 YIPF1Q9Y548 306 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 N6AMT1Q9Y5N5 214 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 GREB1Q4ZG55 1949 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 KPNA4O00629 521 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 PHGDHO43175 533 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 AQP9O43315 295 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 LAG3P18627 525 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MYF6P23409 242 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 NMBRP28336 390 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 TTKP33981 857 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 KPNA2P52292 529 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 RAB10P61026 200 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 PRKCQQ04759 706 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 GALNT2Q10471 571 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 SUZ12Q15022 739 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 RGS21Q2M5E4 152 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 C6orf10Q5SRN2 563 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 TMEM214Q6NUQ4 689 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MSANTD2Q6P1R3 559 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ERMP1Q7Z2K6 904 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 SPATA22Q8NHS9 363 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ZNF420Q8TAQ5 688 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 WBP2Q969T9 261 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 ISOC1Q96CN7 298 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MED30Q96HR3 178 aa10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MRPL57Q9BQC6 102 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 LIN28AQ9H9Z2 209 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MOV10Q9HCE1 1003 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 MRPL17Q9NRX2 175 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 TRNAU1APQ9NX07 287 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 CRNNQ9UBG3 495 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-201ENST00000308521 A0A087X1B8 175 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 TTC24A2A3L6 582 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 ZNF840PA6NDX5 716 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 PRORSD1PA6NEY8 169 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 PSMD12O00232 456 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 PLOD2O00469 737 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 SLC22A1O15245 554 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 COCHO43405 550 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 MTRF1O75570 445 aaKnown RBP10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 STAMBPO95630 424 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 SNRPB2P08579 225 aaKnown RBP10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 CNPP09543 421 aaKnown RBP10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 ALOX5P09917 674 aa10.26□□□□□ -0.77
APOBEC3F-201ENST00000308521 NFKB1P19838 968 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms