RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 FAM136AQ96C01 138 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 MARK4Q96L34 752 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 FOPNLQ96NB1 174 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 C17orf62Q9BQA9 187 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 RTKNQ9BST9 563 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 CFL2Q9Y281 166 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 VPS9D1Q9Y2B5 631 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 CYP7B1O75881 506 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 HDCP19113 662 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 PVALBP20472 110 aaPredicted RBP15.2■□□□□ 0.02
LEMD3-201ENST00000308330 TMBIM6P55061 237 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 PDK2Q15119 407 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 PSMD5Q16401 504 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ECM1Q16610 540 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 SPATS1Q496A3 300 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ZRANB3Q5FWF4 1079 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 DCLRE1AQ6PJP8 1040 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ZCCHC23Q6ZST2 131 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ADCK2Q7Z695 626 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 HIPK1Q86Z02 1210 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 LNX2Q8N448 690 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 LINC00469Q8N7U9 141 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 WDSUB1Q8N9V3 476 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 RNFT2Q96EX2 444 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ZFP42Q96MM3 310 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 UROC1Q96N76 676 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 CCDC115Q96NT0 180 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 APOL2Q9BQE5 337 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 GON7Q9BXV9 100 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 MARCH2Q9P0N8 246 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 LTFP02788 710 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 COL6A2P12110 1019 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 GSTM2P28161 218 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 FMO4P31512 558 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 JAG1P78504 1218 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 PAOXQ6QHF9 649 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 NT5DC3Q86UY8 548 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 UNC93AQ86WB7 457 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ARL6IP6Q8N6S5 226 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ZNF614Q8N883 585 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ART4Q93070 314 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 SERPINB11Q96P15 392 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 CCNB1IP1Q9NPC3 277 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 CRLS1Q9UJA2 301 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 SLC27A5Q9Y2P5 690 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
LEMD3-201ENST00000308330 F8VP50 259 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 MRASO14807 208 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 H2AFYO75367 372 aaKnown RBP15.2■□□□□ 0.02
LEMD3-201ENST00000308330 PROSCO94903 275 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 FOXN2P32314 431 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 GRM5P41594 1212 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 NDUFV1P49821 464 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 P2RX3P56373 397 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 CCNG2Q16589 344 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 FAM76BQ5HYJ3 339 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 HGSNATQ68CP4 663 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 THAP5Q7Z6K1 395 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 GPR180Q86V85 440 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 EID3Q8N140 333 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 DCAF16Q9NXF7 216 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 ANAPC2Q9UJX6 822 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 COL1A2P08123 1366 aa15.2■□□□□ 0.02
LEMD3-201ENST00000308330 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 TIPRLO75663 272 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 CYP3A5P20815 502 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 PSME3P61289 254 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 SLC13A2Q13183 592 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 C1DQ13901 141 aaKnown RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 C16orf46Q6P387 395 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 ZYG11AQ6WRX3 759 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 CFAP77Q6ZQR2 320 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 TOP1MTQ969P6 601 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 SGTBQ96EQ0 304 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 NSMCE2Q96MF7 247 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 BRD9Q9H8M2 597 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 E5RJQ4 531 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 ATG7O95352 703 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 HPCAL1P37235 193 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 RPA4Q13156 261 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 KLHL26Q53HC5 615 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 OFCC1Q8IZS5 231 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 GAL3ST3Q96A11 431 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 PTCD3Q96EY7 689 aaKnown RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 FAM84AQ96KN4 292 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 C12orf57Q99622 126 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 TRIT1Q9H3H1 467 aaKnown RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 CD93Q9NPY3 652 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 SPG21Q9NZD8 308 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 CDV3Q9UKY7 258 aaKnown RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 ACSL5Q9ULC5 683 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 HCN4Q9Y3Q4 1203 aa15.19■□□□□ 0.02
LEMD3-201ENST00000308330 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 DENRO43583 198 aaKnown RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 ATP5C1P36542 298 aaKnown RBP15.19■□□□□ 0.02
LEMD3-201ENST00000308330 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.025e-8■□□□□ 9.7
LEMD3-201ENST00000308330 FNBP1LQ5T0N5 605 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms