RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PTPN5P54829 565 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 POLR2LP62875 67 aaKnown RBP14.16□□□□□ -0.14
C9orf3-202ENST00000297979 PRKAA1Q13131 559 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 CTC1Q2NKJ3 1217 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 CFAP157Q5JU67 520 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 BRAT1Q6PJG6 821 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 TMEM184AQ6ZMB5 413 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 PACS2Q86VP3 889 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 KCNJ9Q92806 393 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 DHRS1Q96LJ7 313 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 DERL2Q9GZP9 239 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 NMUR2Q9GZQ4 415 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 BRD9Q9H8M2 597 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 CYP4F12Q9HCS2 524 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 PCDHB1Q9Y5F3 818 aa14.16□□□□□ -0.14
C9orf3-202ENST00000297979 ZNF195O14628 629 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 PRMT5O14744 637 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 NIPSNAP2O75323 286 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 MYCLP1P12525 358 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 LHCGRP22888 699 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 MPSTP25325 297 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 CCR10P46092 362 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 HK2P52789 917 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 SEMG2Q02383 582 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 SERPINA9Q86WD7 417 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 RHEBL1Q8TAI7 183 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 TMEM237Q96Q45 408 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 GDF15Q99988 308 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 TFB2MQ9H5Q4 396 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 THG1LQ9NWX6 298 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 TRMT6Q9UJA5 497 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 HAO1Q9UJM8 370 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 G3BP2Q9UN86 482 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 WASF2Q9Y6W5 498 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 TRBV5-4A0A0C4DH59 114 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 CFAP73A6NFT4 308 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 H3BMM5 538 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 CCDC22O60826 627 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 LEFTY1O75610 366 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 SNUPNO95149 360 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 CBX6O95503 412 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 FCARP24071 287 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 PDGFRLQ15198 375 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 C4orf46Q504U0 113 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 LYPLAL1Q5VWZ2 237 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 FAM91A1Q658Y4 838 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 LSMEM2Q8N112 164 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 NKAPQ8N5F7 415 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 LSM14AQ8ND56 463 aaKnown RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 KLHL29Q96CT2 875 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 PRR11Q96HE9 360 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 CNDP1Q96KN2 507 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 B4GALT6Q9UBX8 382 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 CRLS1Q9UJA2 301 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 TRANK1O15050 2925 aa14.15□□□□□ -0.14
C9orf3-202ENST00000297979 KIF26AQ9ULI4 1882 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-202ENST00000297979 E5RI56 91 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 LINC01565O15544 149 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ZNF7P17097 686 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 KCNC1P48547 511 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 IDH3AP50213 366 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 RPL14P50914 215 aaKnown RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ATP6V0D1P61421 351 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ST8SIA6P61647 398 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 NFKB2Q00653 900 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 HYAL1Q12794 435 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 CHRNA6Q15825 494 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 PDCD2Q16342 344 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 GAB4Q2WGN9 574 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 GPR33Q49SQ1 333 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 PREPLQ4J6C6 727 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ANKRD54Q6NXT1 300 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 SYCE2Q6PIF2 218 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 RBFAQ8N0V3 343 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 SIDT2Q8NBJ9 832 aaKnown RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 AGR3Q8TD06 166 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 PBXIP1Q96AQ6 731 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 OSBPL1AQ9BXW6 950 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 CLPBQ9H078 707 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 GALPQ9UBC7 116 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 IL36AQ9UHA7 158 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 CDH7Q9ULB5 785 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 APOBEC2Q9Y235 224 aaKnown RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 PRRC2BQ5JSZ5 2229 aaKnown RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 SMIM24O75264 130 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 T-ENOLP0DO92 83 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 CHRM3P20309 590 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 RPS3P23396 243 aaKnown RBP eCLIP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ACRV1P26436 265 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 PTSQ03393 145 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 TUBB3Q13509 450 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 OR4D1Q15615 310 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 UGT3A1Q6NUS8 523 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 MYO1HQ8N1T3 1032 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 GPR26Q8NDV2 337 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms