RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 NCF1CA8MVU1 366 aaPredicted RBP14.97□□□□□ -0.01
CCDC116-201ENST00000292779 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 TNFAIP8O95379 198 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 CLPTM1O96005 669 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 TFAP2AP05549 437 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 NCF1P14598 390 aaPredicted RBP14.97□□□□□ -0.01
CCDC116-201ENST00000292779 ATP6V0D1P61421 351 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 CYTH1Q15438 398 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 ANKS6Q68DC2 871 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 HMBOX1Q6NT76 420 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 PSAPL1Q6NUJ1 521 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 AMIGO2Q86SJ2 522 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 NPAS4Q8IUM7 802 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 PIANPQ8IYJ0 282 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 C2orf15Q8WU43 125 aaKnown RBP14.97□□□□□ -0.01
CCDC116-201ENST00000292779 SLC45A3Q96JT2 553 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 BIRC8Q96P09 236 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 TCF12Q99081 682 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 SEZ6LQ9BYH1 1024 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 AGO1Q9UL18 857 aaKnown RBP14.97□□□□□ -0.01
CCDC116-201ENST00000292779 TIMM22Q9Y584 194 aa14.97□□□□□ -0.01
CCDC116-201ENST00000292779 OAS3Q9Y6K5 1087 aaKnown RBP14.97□□□□□ -0.01
CCDC116-201ENST00000292779 SMIM31A0A1B0GVY4 71 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 TRIM43BA6NCK2 446 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CBX4O00257 560 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 BTN3A1O00481 513 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ANGPT2O15123 496 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 OR1I1O60431 355 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CRCPO75575 148 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 KLKB1P03952 638 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 RHOCP08134 193 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 FAM58BPP0C7Q3 252 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 EN2P19622 333 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ATP6V1B2P21281 511 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 GRIA3P42263 894 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 AGTR2P50052 363 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 IKBKEQ14164 716 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 PTPRRQ15256 657 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 TMCO2Q7Z6W1 182 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CRIPAKQ8N1N5 446 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 TRIM43Q96BQ3 446 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CYP2S1Q96SQ9 504 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CDK5RAP1Q96SZ6 601 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 UHRF1Q96T88 793 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 SLC2A11Q9BYW1 496 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ZNF696Q9H7X3 374 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 NOL11Q9H8H0 719 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 SDR39U1Q9NRG7 319 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 FKBPLQ9UIM3 349 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 FNDC3AQ9Y2H6 1198 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ARIH1Q9Y4X5 557 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 COCHO43405 550 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CLDN11O75508 207 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 MATN4O95460 622 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 STAMBPO95630 424 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 RPS17P08708 135 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 LPOP22079 712 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 PRDX3P30048 256 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 OR1D2P34982 312 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 RPL5P46777 297 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 YBX1P67809 324 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CAPRIN1Q14444 709 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 RPS6KA2Q15349 733 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 SIDT2Q8NBJ9 832 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 OR2T34Q8NGX1 318 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 OR2T3Q8NH03 318 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 FAM110BQ8TC76 370 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ZNF597Q96LX8 424 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 PRPF18Q99633 342 aaKnown RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 CIB1Q99828 191 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 HOPXQ9BPY8 73 aaPredicted RBP14.96□□□□□ -0.01
CCDC116-201ENST00000292779 BPIFA1Q9NP55 256 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 GKN1Q9NS71 199 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ABCD2Q9UBJ2 740 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 RAI2Q9Y5P3 530 aa14.96□□□□□ -0.01
CCDC116-201ENST00000292779 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.95□□□□□ -0.02
CCDC116-201ENST00000292779 ILVBLA1L0T0 632 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 ZNF840PA6NDX5 716 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 SYCE1LA8MT33 242 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 H0YJX3 145 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 FXYD1O00168 92 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 TSPAN3O60637 253 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 NIPSNAP2O75323 286 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 TIPRLO75663 272 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 F11P03951 625 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 PYGLP06737 847 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 ATP6V1B1P15313 513 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 CHRM3P20309 590 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 PSMA3P25788 255 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 MC4RP32245 332 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 DIO3P55073 304 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 ZNF177Q13360 481 aaPredicted RBP14.95□□□□□ -0.02
CCDC116-201ENST00000292779 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC116-201ENST00000292779 C16orf59Q7L2K0 433 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 SLC15A3Q8IY34 581 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 NKAPQ8N5F7 415 aaKnown RBP14.95□□□□□ -0.02
CCDC116-201ENST00000292779 EFHBQ8N7U6 833 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 CANT1Q8WVQ1 401 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 SEPT8Q92599 483 aa14.95□□□□□ -0.02
CCDC116-201ENST00000292779 PPWD1Q96BP3 646 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms