RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NUDT8Q8WV74 236 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 SNX19Q92543 992 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 RSL24D1Q9UHA3 163 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 DNMT3LQ9UJW3 386 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 H3BNX3 289 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 TRMUO75648 421 aaKnown RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 APLP1P51693 650 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 SMAD3P84022 425 aaKnown RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 LCP2Q13094 533 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 C18orf21Q32NC0 220 aaPredicted RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 GLYATQ6IB77 296 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 CHSY3Q70JA7 882 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 SZRD1Q7Z422 152 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 SH3RF2Q8TEC5 729 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 IMP4Q96G21 291 aaKnown RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 C1QTNF1Q9BXJ1 281 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 TNKS2Q9H2K2 1166 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 TRIP12Q14669 1992 aaPredicted RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 CYBBP04839 570 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 SBK3P0C264 359 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 ADARP55265 1226 aaKnown RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 OGFRL1Q5TC84 451 aaPredicted RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 GRAMD4Q6IC98 578 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 TSSK3Q96PN8 268 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 TRMOQ9BU70 441 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 C9orf16Q9BUW7 83 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 CLK4Q9HAZ1 481 aaKnown RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 PARVBQ9HBI1 364 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 EVLQ9UI08 416 aaPredicted RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 PCDHGA7Q9Y5G6 932 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 NUP214P35658 2090 aaPredicted RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 RTN3O95197 1032 aaPredicted RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 PRKCQQ04759 706 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 DGCR6Q14129 220 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 RIN3Q8TB24 985 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 TRIB2Q92519 343 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 BEGAINQ9BUH8 593 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 PNPLA3Q9NST1 481 aa15.79■□□□□ 0.12
SMAD6-201ENST00000288840 OLA1Q9NTK5 396 aaKnown RBP15.79■□□□□ 0.12
SMAD6-201ENST00000288840 HHLA1C9JL84 531 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 GJB5O95377 273 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 HIST1H2AGP0C0S8 130 aaPredicted RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 HIST1H2ADP20671 130 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 GRIA2P42262 883 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 POLR2JP52435 117 aaKnown RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 HECTD3Q5T447 861 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 LRRC49Q8IUZ0 686 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 OR13J1Q8NGT2 312 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 LRRC58Q96CX6 371 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 HIST1H2AHQ96KK5 128 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 HIST1H2AJQ99878 128 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 H2AFJQ9BTM1 129 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 MRGBPQ9NV56 204 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 EXD2Q9NVH0 621 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 POLR3BQ9NW08 1133 aaPredicted RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 EIF3LQ9Y262 564 aaKnown RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 CROCCQ5TZA2 2017 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 CYP4B1P13584 511 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 IDO1P14902 403 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 PBLDP30039 288 aaPredicted RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 NDST2P52849 883 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 LAPTM5Q13571 262 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 ZNF555Q8NEP9 628 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 BPIFB6Q8NFQ5 453 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 FAM110BQ8TC76 370 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 ZNF419Q96HQ0 510 aaPredicted RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 BDH2Q9BUT1 245 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 CIPCQ9C0C6 399 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 MFSD1Q9H3U5 465 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 POLG2Q9UHN1 485 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 A0A087WXM4 84 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 NBNO60934 754 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 NTRK1P04629 796 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 HALP42357 657 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 PFKPQ01813 784 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 IL10RBQ08334 325 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 AFTPHQ6ULP2 937 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 RNF19BQ6ZMZ0 732 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 ADI1Q9BV57 179 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 GALNT8Q9NY28 637 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 KIF17Q9P2E2 1029 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 LEF1Q9UJU2 399 aaPredicted RBP15.78■□□□□ 0.12
SMAD6-201ENST00000288840 USP22Q9UPT9 525 aa15.78■□□□□ 0.12
SMAD6-201ENST00000288840 AGRPO00253 132 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 NOBOXO60393 691 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 TMCC1O94876 653 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 ABCB1P08183 1280 aaPredicted RBP15.77■□□□□ 0.12
SMAD6-201ENST00000288840 GNAO1P09471 354 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 ZNF37AP17032 561 aaPredicted RBP15.77■□□□□ 0.12
SMAD6-201ENST00000288840 SLC7A1P30825 629 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 HK2P52789 917 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 RAB41Q5JT25 222 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 NKAPQ8N5F7 415 aaKnown RBP15.77■□□□□ 0.12
SMAD6-201ENST00000288840 PNPT1Q8TCS8 783 aaKnown RBP15.77■□□□□ 0.12
SMAD6-201ENST00000288840 IPPKQ9H8X2 491 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 PCDHB8Q9UN66 801 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 SH3BP1Q9Y3L3 701 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 SOCS2O14508 198 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 ARPC2O15144 300 aa15.77■□□□□ 0.12
SMAD6-201ENST00000288840 TBC1D4O60343 1298 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms