RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF711Q9Y462 761 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 GIPC1O14908 333 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 E2F6O75461 281 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 HNRNPA1P09651 372 aaKnown RBP eCLIP10.29□□□□□ -0.76
UPF3B-201ENST00000276201 FASP25445 335 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 HOXA9P31269 272 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 CDH17Q12864 832 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 SEMA3BQ13214 749 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 AGKQ53H12 422 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 CCDC92Q53HC0 331 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-201ENST00000276201 ATAT1Q5SQI0 421 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 NAPEPLDQ6IQ20 393 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 FKBP9P1Q75LS8 142 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 TCEAL8Q8IYN2 117 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 SIX6OS1Q8N1H7 587 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 ZNF786Q8N393 782 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 C12orf29Q8N999 325 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 FAM156AQ8NDB6 213 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 OR13F1Q8NGS4 319 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 ADAM32Q8TC27 787 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 KCTD4Q8WVF5 259 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 TSGA13Q96PP4 275 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 NPY6RQ99463 290 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 TRPC7Q9HCX4 862 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 RIC8BQ9NVN3 520 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 KLHL8Q9P2G9 620 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-201ENST00000276201 XPR1Q9UBH6 696 aa10.29□□□□□ -0.76
UPF3B-201ENST00000276201 TDRKHQ9Y2W6 561 aaKnown RBP10.29□□□□□ -0.76
UPF3B-201ENST00000276201 HEMK1Q9Y5R4 338 aaPredicted RBP10.29□□□□□ -0.76
UPF3B-201ENST00000276201 ACOX3O15254 700 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CCL16O15467 120 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 HCRTO43612 131 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 NOL3O60936 208 aaKnown RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 DNAJB5O75953 348 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 SEC14L2O76054 403 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ZBTB11O95625 1053 aaPredicted RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 FUCA1P04066 466 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ATP6V1B2P21281 511 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 NOS2P35228 1153 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 GNL1P36915 607 aaPredicted RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CCR10P46092 362 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ATXN1P54253 815 aaKnown RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 POU4F1Q01851 419 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 GPR17Q13304 367 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 PMS2P3Q13401 168 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 SLC14A2Q15849 920 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 AARS2Q5JTZ9 985 aaKnown RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CCNYL2Q5T2Q4 361 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 OTUD1Q5VV17 481 aaPredicted RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 NANOGP8Q6NSW7 305 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CNSTQ6PJW8 725 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CCDC149Q6ZUS6 474 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 GALNT7Q86SF2 657 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 SLC22A9Q8IVM8 553 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 THEM5Q8N1Q8 247 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 TXNDC5Q8NBS9 432 aaKnown RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ACVR1CQ8NER5 493 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 TRPV3Q8NET8 790 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 AGR3Q8TD06 166 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CANT1Q8WVQ1 401 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 TANKQ92844 425 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 MFSD3Q96ES6 412 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 PPP1R2P1Q96PQ5 205 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 PSD2Q9BQI7 771 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 GID8Q9NWU2 228 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CDC14AQ9UNH5 594 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 INSL5Q9Y5Q6 135 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 DHRS12A0PJE2 317 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 MTMR11A4FU01 709 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 LOC730098B7Z3J9 87 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 PRRG1O14668 218 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 GABRDO14764 452 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 TIPRLO75663 272 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 POU2F2P09086 479 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 STMN1P16949 149 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CKMT2P17540 419 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 UGT1A6P19224 532 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 TCN1P20061 433 aaPredicted RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 UGT1A1P22309 533 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 UGT1A4P22310 534 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 CD68P34810 354 aaPredicted RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 UGT1A3P35503 534 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 UGT1A5P35504 534 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ADARB1P78563 741 aaKnown RBP10.28□□□□□ -0.76
UPF3B-201ENST00000276201 NFATC3Q12968 1075 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ANKDD1AQ495B1 522 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 SLC39A12Q504Y0 691 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 PCID2Q5JVF3 399 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 BSPRYQ5W0U4 402 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 ZNF773Q6PK81 442 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 FRA10AC1Q70Z53 315 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 RTL10Q7L3V2 364 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
UPF3B-201ENST00000276201 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms