RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 XKR5Q6UX68 686 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 NLRP8Q86W28 1048 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 PTRH1Q86Y79 214 aaKnown RBP8.87□□□□□ -0.99
TPM3-201ENST00000271850 UNC5BQ8IZJ1 945 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 AGBL5Q8NDL9 886 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 FAF2Q96CS3 445 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 NUP85Q9BW27 656 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 FAM117AQ9C073 453 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 CDH19Q9H159 772 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 SLC25A18Q9H1K4 315 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 EPN3Q9H201 632 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 ARFGAP3Q9NP61 516 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 SIDT1Q9NXL6 827 aaKnown RBP8.87□□□□□ -0.99
TPM3-201ENST00000271850 ANAPC7Q9UJX3 599 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 KCNK6Q9Y257 313 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 A8MU76 341 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 K7EM74 188 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 MATN3O15232 486 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 ZNF30P17039 623 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 DESP17661 470 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 OAS2P29728 719 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 CA5AP35218 305 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 SPINT3P49223 89 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 GFERP55789 205 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 UBE2IP63279 158 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 SH3BP2P78314 561 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 GPLD1P80108 840 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 MC2RQ01718 297 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 TLE1Q04724 770 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 NFATC2Q13469 925 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 PIGHQ14442 188 aaPredicted RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 SKIDA1Q1XH10 827 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 KHDC1Q4VXA5 237 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 FIGNQ5HY92 759 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 IYDQ6PHW0 289 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 ATG14Q6ZNE5 492 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 RETREG3Q86VR2 466 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 FAM129CQ86XR2 697 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 GALNT13Q8IUC8 556 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 CACNA2D3Q8IZS8 1091 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 PAF1Q8N7H5 531 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 CNTD1Q8N815 330 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 LPCAT1Q8NF37 534 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 FATE1Q969F0 183 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 TRIB3Q96RU7 358 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 ARHGAP9Q9BRR9 750 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 TBC1D10AQ9BXI6 508 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 PACSIN1Q9BY11 444 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 POLR1EQ9GZS1 481 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 MRPL47Q9HD33 250 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 SARS2Q9NP81 518 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.99
TPM3-201ENST00000271850 KCTD5Q9NXV2 234 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 SLC39A1Q9NY26 324 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 RCOR3Q9P2K3 495 aaPredicted RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 SLC23A2Q9UGH3 650 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 TMPRSS11EQ9UL52 423 aa8.86□□□□□ -0.99
TPM3-201ENST00000271850 MRPS18BQ9Y676 258 aaKnown RBP8.86□□□□□ -0.99
TPM3-201ENST00000271850 USP9YO00507 2555 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 CLEC18AA5D8T8 446 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 C3orf70A6NLC5 250 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 NUAK1O60285 661 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 PPFIA2O75334 1257 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 FURINP09958 794 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ACP5P13686 325 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ZNF28P17035 718 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ZNF8P17098 575 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 CSTF2P33240 577 aaKnown RBP eCLIP8.85□□□□□ -0.99
TPM3-201ENST00000271850 SERPINB6P35237 376 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 HHEXQ03014 270 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ITKQ08881 620 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 KCNAB2Q13303 367 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 LRP8Q14114 963 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 KRT81Q14533 505 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ANKRD20A8PQ5CZ79 823 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 SNAP47Q5SQN1 464 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 BORAQ6PGQ7 559 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 WDR74Q6RFH5 385 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 CLEC18BQ6UXF7 455 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 CHST15Q7LFX5 561 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 ZNF547Q8IVP9 402 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 NRSN1Q8IZ57 195 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 PLD5Q8N7P1 536 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 CLEC18CQ8NCF0 446 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 GPR26Q8NDV2 337 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 EXD1Q8NHP7 514 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ZNF564Q8TBZ8 553 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 RAPGEF5Q92565 580 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 TADA1Q96BN2 335 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 SLC45A3Q96JT2 553 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 TSGA13Q96PP4 275 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 SLC38A3Q99624 504 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 PCDH9Q9HC56 1237 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 PRDM8Q9NQV8 689 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 VPS18Q9P253 973 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 ATXN10Q9UBB4 475 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 TMEM184BQ9Y519 407 aaPredicted RBP8.85□□□□□ -0.99
TPM3-201ENST00000271850 PCDHB11Q9Y5F2 797 aa8.85□□□□□ -0.99
TPM3-201ENST00000271850 HEMK1Q9Y5R4 338 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms