RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ERVK-21P61565 698 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 CBX2Q14781 532 aaPredicted RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 ATG10Q9H0Y0 220 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 SMOC2Q9H3U7 446 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 C3orf18Q9UK00 162 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 POLR3HQ9Y535 204 aaPredicted RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 DHRS12A0PJE2 317 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 GSAPA4D1B5 854 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 IQCF5A8MTL0 148 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF623O75123 536 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 NUDT14O95848 222 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 GTF2E2P29084 291 aaKnown RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 IDH2P48735 452 aaKnown RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 ZC3H7AQ8IWR0 971 aaKnown RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 FSTL5Q8N475 847 aaPredicted RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 RTKNQ9BST9 563 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 EPB41L4BQ9H329 900 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 VRTNQ9H8Y1 702 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 TIMM22Q9Y584 194 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 HS3ST4Q9Y661 456 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 IRS2Q9Y4H2 1338 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 DNAJC25-GNG10A0A024R161 153 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 HLA-DQB2P05538 268 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 GALTP07902 379 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 PTGER3P43115 390 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 LCP2Q13094 533 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 RFTN1Q14699 578 aaPredicted RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 LRRC73Q5JTD7 316 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 ITCHQ96J02 903 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 APOLD1Q96LR9 279 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 AARSD1Q9BTE6 412 aaKnown RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 CCDC28BQ9BUN5 200 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 IPPKQ9H8X2 491 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 TCRBV7S3A2A0A539 114 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 BBIP1A8MTZ0 92 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 DNM1LO00429 736 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 OGNP20774 298 aaKnown RBP15.32■□□□□ 0.04
TIMP3-201ENST00000266085 TRIM16LQ309B1 348 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 PLA2G4EQ3MJ16 856 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 C1orf220Q5T0J3 134 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 TRIM40Q6P9F5 258 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 RIPOR3Q96MK2 946 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 TRAPPC9Q96Q05 1148 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 EGFL7Q9UHF1 273 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 ANGPT4Q9Y264 503 aa15.32■□□□□ 0.04
TIMP3-201ENST00000266085 DYTNA2CJ06 578 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ANPEPP15144 967 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 GJA5P36382 358 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 SPATA19Q7Z5L4 167 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 PHYKPLQ8IUZ5 450 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 C8orf59Q8N0T1 100 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 FITM2Q8N6M3 262 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 GLIS1Q8NBF1 620 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 NPAS2Q99743 824 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 HOPXQ9BPY8 73 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ILVBLA1L0T0 632 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CCR4P51679 360 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 NAE1Q13564 534 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CHSY3Q70JA7 882 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF605Q86T29 641 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 BANPQ8N9N5 519 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 GSTCDQ8NEC7 633 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 RERGQ96A58 199 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 SPATA5L1Q9BVQ7 753 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 GPR88Q9GZN0 384 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF490Q9ULM2 529 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CHD4Q14839 1912 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 C2orf71A6NGG8 1288 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 SNAP91O60641 907 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CNMDO75829 334 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 NR2F1P10589 423 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 VAV1P15498 845 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 PPIBP23284 216 aaKnown RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ACVRL1P37023 503 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CLCQ05315 142 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 MRPL28Q13084 256 aaKnown RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ZNHIT3Q15649 155 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 PRR23CQ6ZRP0 262 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CPNE9Q8IYJ1 553 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 C2orf73Q8N5S3 287 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 SMG8Q8ND04 991 aaKnown RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 PHC3Q8NDX5 983 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 TWIST2Q8WVJ9 160 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 LAMB4A4D0S4 1761 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 GSC2O15499 205 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 FGF18O76093 207 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 HAPLN1P10915 354 aaPredicted RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF460Q14592 562 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 AAGABQ6PD74 315 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 TMEM40Q8WWA1 233 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 POP5Q969H6 163 aaKnown RBP15.31■□□□□ 0.04
TIMP3-201ENST00000266085 CYP2S1Q96SQ9 504 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 LRTM1Q9HBL6 345 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 MIOSQ9NXC5 875 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 NUDT4Q9NZJ9 180 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 VPS4AQ9UN37 437 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 ERVW-1Q9UQF0 538 aa15.31■□□□□ 0.04
TIMP3-201ENST00000266085 TRBV23OR9-2A0A075B6M9 112 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms