RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 AP4S1Q9Y587 144 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 IGLV3-10A0A075B6K4 115 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 PLOD2O00469 737 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 SLC22A2O15244 555 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ATE1O95260 518 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 RHOCP08134 193 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 INHBBP09529 407 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 HOXC13P31276 330 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 TMED10P49755 219 aaKnown RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 MAXP61244 160 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 NIPAL4Q0D2K0 466 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 OLIG2Q13516 323 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 BCL2A1Q16548 175 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 PPM1JQ5JR12 505 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 NIPAL1Q6NVV3 410 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 RTL10Q7L3V2 364 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 CDKL3Q8IVW4 592 aaPredicted RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ADAMTS16Q8TE57 1224 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 CHPT1Q8WUD6 406 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ASIC4Q96FT7 647 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF419Q96HQ0 510 aaPredicted RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 QKIQ96PU8 341 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 SLC29A1Q99808 456 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 BBS2Q9BXC9 721 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 TMEM248Q9NWD8 314 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 FAM32AQ9Y421 112 aaKnown RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 BCLAF3A2AJT9 711 aaKnown RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TYW5A2RUC4 315 aaKnown RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 DRGXA6NNA5 263 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 SNAP91O60641 907 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ALDH1A2O94788 518 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TPSB2P20231 275 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 CDH3P22223 829 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ART3Q13508 389 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 RFTN1Q14699 578 aaPredicted RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TPSAB1Q15661 275 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 RNF219Q5W0B1 726 aaPredicted RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 OGFOD2Q6N063 350 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 LYSMD3Q7Z3D4 306 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 LRTOMTQ8WZ04 291 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ERLEC1Q96DZ1 483 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ASB16Q96NS5 453 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ARMC7Q9H6L4 198 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 WDR55Q9H6Y2 383 aaPredicted RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 EFCAB1Q9HAE3 211 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 PRDM16Q9HAZ2 1276 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 SP110Q9HB58 689 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF358Q9NW07 568 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 A0A1B0GVM2 712 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TCAF2A6NFQ2 919 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 HEPACAM2A8MVW5 462 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TMEM114B3SHH9 223 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TMX2-CTNND1H3BSU7 103 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 TRIM38O00635 465 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 HTRA2O43464 458 aaPredicted RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 GJB3O75712 270 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 METTL18O95568 372 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 GABRB3P28472 473 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ITKQ08881 620 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 GALNT2Q10471 571 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 HERC3Q15034 1050 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF77Q15935 545 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 CCDC153Q494R4 210 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 STEAP4Q687X5 459 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 NAPRTQ6XQN6 538 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 CPNE9Q8IYJ1 553 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 CPSF7Q8N684 471 aaKnown RBP12.57□□□□□ -0.4
PRPF6-201ENST00000266079 C17orf50Q8WW18 174 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 CDKL2Q92772 493 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 EXOC2Q96KP1 924 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
PRPF6-201ENST00000266079 ARSAP15289 507 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 TCN1P20061 433 aaPredicted RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 DDX6P26196 483 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 TYK2P29597 1187 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 ADSLP30566 484 aaPredicted RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 GRIA1P42261 906 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 KCNC4Q03721 635 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 LSM12Q3MHD2 195 aaKnown RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 C16orf87Q6PH81 154 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 XKR5Q6UX68 686 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 C4orf22Q6V702 233 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 FAM47BQ8NA70 645 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 FGF14Q92915 247 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 CDX2Q99626 313 aaPredicted RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 S1PR5Q9H228 398 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 RPF2Q9H7B2 306 aaKnown RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 TRNAU1APQ9NX07 287 aaKnown RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 PTBP2Q9UKA9 531 aaKnown RBP12.56□□□□□ -0.4
PRPF6-201ENST00000266079 DOCK4Q8N1I0 1966 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
PRPF6-201ENST00000266079 NEMP1O14524 444 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms