RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 SOAT1P35610 550 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 MAPK9P45984 424 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 GAREM2Q75VX8 874 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 MTSS1LQ765P7 747 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 CUZD1Q86UP6 607 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 HOMEZQ8IX15 550 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 DEFB107AQ8IZN7 70 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 DCBLD1Q8N8Z6 715 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ESAMQ96AP7 390 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 CNDP1Q96KN2 507 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 B4GALT6Q9UBX8 382 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 PNMA8BQ9ULN7 279 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 TMCO1Q9UM00 188 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ORC6Q9Y5N6 252 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 PLXNB2O15031 1838 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 RFXAPO00287 272 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ULK1O75385 1050 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 PGLSO95336 258 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 GPR33Q49SQ1 333 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ZYG11AQ6WRX3 759 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 LCA5Q86VQ0 697 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 CLYBLQ8N0X4 340 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ACAT2Q9BWD1 397 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 OSBPL1AQ9BXW6 950 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 DNMT3BQ9UBC3 853 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 LZTS1Q9Y250 596 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 TRAF6Q9Y4K3 522 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 NEMP2A6NFY4 417 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 MEI4A8MW99 385 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 UPK3BL1B0FP48 263 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 UPK3BL2E5RIL1 263 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 LEFTY1O75610 366 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 LBPP18428 481 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 KCNA5P22460 613 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 NKX3-2P78367 333 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 WDR55Q9H6Y2 383 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 UBXN8O00124 270 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 RGS14O43566 566 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 ALDH1A2O94788 518 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 FOXN2P32314 431 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 NEK3P51956 506 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 UBAP2Q5T6F2 1119 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 KYQ8NBH2 561 aa14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 IMP3Q9NV31 184 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-201ENST00000265810 OTCP00480 354 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 RPIAP49247 311 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 FLOT2Q14254 428 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 LRRC36Q1X8D7 754 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 RNF43Q68DV7 783 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 NADSYN1Q6IA69 706 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 SCUBE1Q8IWY4 988 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 FAM9CQ8IZT9 166 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TDRD1Q9BXT4 1180 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 CDH19Q9H159 772 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 COG4Q9H9E3 785 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 KIF13BQ9NQT8 1826 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 SCAMP1O15126 338 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 PAPSS2O95340 614 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TOP3BO95985 862 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 F11P03951 625 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 ALOX15P16050 662 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 NRG1Q02297 640 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TRAF2Q12933 501 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TMEM135Q86UB9 458 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 CILP2Q8IUL8 1156 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TRMOQ9BU70 441 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 COPS7BQ9H9Q2 264 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 V9GYQ6 96 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TRIP12Q14669 1992 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TULP3O75386 442 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TM7SF2O76062 418 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 PDHA1P08559 390 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 PSMC3P17980 439 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 ITPKAP23677 461 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 CYP2A13Q16696 494 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 BNC2Q6ZN30 1099 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 PIM3Q86V86 326 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 MIER2Q8N344 545 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 CXorf40BQ96DE9 158 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 ATG10Q9H0Y0 220 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 SH3BP4Q9P0V3 963 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 KCNE2Q9Y6J6 123 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 WASH4PA8MWX3 477 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TTC34A8MYJ7 566 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 CPSF4O95639 269 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 KLKB1P03952 638 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 LINC00032P0C843 101 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 RPL26P61254 145 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 ACSM2AQ08AH3 577 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 ACSM2BQ68CK6 577 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 Q6ZVL8 140 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 HTR3DQ70Z44 454 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 TMPRSS6Q8IU80 811 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 SIPA1Q96FS4 1042 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 RUBCNLQ9H714 662 aa14.36□□□□□ -0.11
PDLIM2-201ENST00000265810 RPL26L1Q9UNX3 145 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms