RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 HERC6Q8IVU3 1022 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 TNIP2Q8NFZ5 429 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 TOP1MTQ969P6 601 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 NSMCE3Q96MG7 304 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 GLT1D1Q96MS3 346 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 COG8Q96MW5 612 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 GNPTGQ9UJJ9 305 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 TBC1D4O60343 1298 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 RPP40O75818 363 aaKnown RBP22.47■■□□□ 1.19
MCF2L-201ENST00000261963 SUPT7LO94864 414 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 SUOXP51687 545 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 PSME3P61289 254 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 MOGQ16653 247 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 ALG1LQ6GMV1 187 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 LGI2Q8N0V4 545 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 SNX31Q8N9S9 440 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 BRSK1Q8TDC3 778 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 GIPC2Q8TF65 315 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 TFAP2CQ92754 450 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 TRIB3Q96RU7 358 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 NOL11Q9H8H0 719 aaKnown RBP22.47■■□□□ 1.19
MCF2L-201ENST00000261963 PALMDQ9NP74 551 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 DUS2Q9NX74 493 aaKnown RBP22.47■■□□□ 1.19
MCF2L-201ENST00000261963 CACNA2D2Q9NY47 1150 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 PRSS56P0CW18 603 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 SLC6A4P31645 630 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 TTKP33981 857 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 DUSP4Q13115 394 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 LRP8Q14114 963 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 FASTKQ14296 549 aaKnown RBP22.46■■□□□ 1.19
MCF2L-201ENST00000261963 RTP2Q5QGT7 225 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 PCDH20Q8N6Y1 951 aaKnown RBP22.46■■□□□ 1.19
MCF2L-201ENST00000261963 TERB1Q8NA31 727 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 DOK1Q99704 481 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 NPLQ9BXD5 320 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-201ENST00000261963 PCDHAC1Q9H158 963 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 A0A1W2PPW3 197 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 SLC11A1P49279 550 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 HERVK_113P63132 956 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 UGT3A2Q3SY77 523 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 AGKQ53H12 422 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 OR7D4Q8NG98 312 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 EFHD1Q9BUP0 239 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 ERVK-6Q9BXR3 956 aa22.46■■□□□ 1.19
MCF2L-201ENST00000261963 CASP8AP2Q9UKL3 1982 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 GREB1Q4ZG55 1949 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 MT-CO1P00395 513 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 ZNF37AP17032 561 aaPredicted RBP22.45■■□□□ 1.18
MCF2L-201ENST00000261963 DCKP27707 260 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 SLC7A1P30825 629 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 KCNC4Q03721 635 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 OR4D1Q15615 310 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 C5orf22Q49AR2 442 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 GPR107Q5VW38 600 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 REP15Q6BDI9 236 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 MRNIPQ6NTE8 343 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 LARP4Q71RC2 724 aaKnown RBP eCLIP22.45■■□□□ 1.18
MCF2L-201ENST00000261963 EXT2Q93063 718 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 SLCO4A1Q96BD0 722 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 C3orf30Q96M34 536 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 CASD1Q96PB1 797 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 CCDC167Q9P0B6 97 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 E7ENX8 843 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 F5H5T6 163 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 H3BMM5 538 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 PSMD8P48556 350 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 CDH13P55290 713 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 STX5Q13190 355 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 PPP4R4Q6NUP7 873 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 OR4L1Q8NH43 312 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 PPWD1Q96BP3 646 aaKnown RBP22.45■■□□□ 1.18
MCF2L-201ENST00000261963 ZNF599Q96NL3 588 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 UHRF1Q96T88 793 aaPredicted RBP22.45■■□□□ 1.18
MCF2L-201ENST00000261963 FBRSL1Q9HCM7 1045 aaKnown RBP22.45■■□□□ 1.18
MCF2L-201ENST00000261963 CATSPERZQ9NTU4 200 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 GID8Q9NWU2 228 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 KIAA1522Q9P206 1035 aaPredicted RBP22.45■■□□□ 1.18
MCF2L-201ENST00000261963 SARDHQ9UL12 918 aa22.45■■□□□ 1.18
MCF2L-201ENST00000261963 ATP6AP2A0A1C7CYW4 349 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 PPP6CO00743 305 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 ATP6AP2O75787 350 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 SULT1C4O75897 302 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 SERPINF2P08697 491 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 MTHFD2P13995 350 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 ATF6P18850 670 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 RGRP47804 291 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 STC1P52823 247 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 SH3BP2P78314 561 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 FGD3Q5JSP0 725 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 AARS2Q5JTZ9 985 aaKnown RBP22.44■■□□□ 1.18
MCF2L-201ENST00000261963 HMBOX1Q6NT76 420 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 FUT10Q6P4F1 479 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 ABI1Q8IZP0 508 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 RYBPQ8N488 228 aaPredicted RBP22.44■■□□□ 1.18
MCF2L-201ENST00000261963 PTGR2Q8N8N7 351 aaPredicted RBP22.44■■□□□ 1.18
MCF2L-201ENST00000261963 SCAIQ8N9R8 606 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 MGME1Q9BQP7 344 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 HEPHQ9BQS7 1158 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 MRGBPQ9NV56 204 aa22.44■■□□□ 1.18
MCF2L-201ENST00000261963 RIMKLBQ9ULI2 386 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms