RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CD99L2Q8TCZ2 262 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 FAR1Q8WVX9 515 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 AP2M1Q96CW1 435 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 LRTM1Q9HBL6 345 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 NDRG2Q9UN36 371 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 HBS1LQ9Y450 684 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 KCNU1A8MYU2 1149 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 H3BM21 787 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CLDN11O75508 207 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 C4BPAP04003 597 aaKnown RBP12.04□□□□□ -0.48
COL8A1-201ENST00000261037 MAGP20916 626 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 CES1P23141 567 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 NAA20P61599 178 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 SCRN3Q0VDG4 424 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 VPS26BQ4G0F5 336 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PPP1R15BQ5SWA1 713 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 MREGQ8N565 214 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 OR52J3Q8NH60 311 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 TRIM63Q969Q1 353 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 KLRG1Q96E93 195 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 TCF25Q9BQ70 676 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 LHX5Q9H2C1 402 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PNPLA3Q9NST1 481 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 PADI3Q9ULW8 664 aa12.04□□□□□ -0.48
COL8A1-201ENST00000261037 COL1A2P08123 1366 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SPAM1P38567 509 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 PTPN9P43378 593 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 C2orf80Q0P641 193 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 DCTN2Q13561 401 aaKnown RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 TEX44Q53QW1 395 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 GBA3Q9H227 469 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 RHOJQ9H4E5 214 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 KCTD5Q9NXV2 234 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 RSL24D1Q9UHA3 163 aaKnown RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 RPTORQ8N122 1335 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 BTBD19C9JJ37 291 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 MT-ND1P03886 318 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 UGT1A5P35504 534 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SEMG2Q02383 582 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SULT2A1Q06520 285 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 PARP15Q460N3 678 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 REP15Q6BDI9 236 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CFAP206Q8IYR0 622 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SLC43A3Q8NBI5 491 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ZCCHC10Q8TBK6 192 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 PMEPA1Q969W9 287 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 JSRP1Q96MG2 331 aaPredicted RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 AIF1LQ9BQI0 150 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CHID1Q9BWS9 393 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 OXCT2Q9BYC2 517 aaPredicted RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 TRIM39Q9HCM9 518 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 DNAJC11Q9NVH1 559 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SHPRHQ149N8 1683 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 FGBP02675 491 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 GIMD1P0DJR0 217 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SELPP16109 830 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CTSKP43235 329 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 YAP1P46937 504 aaKnown RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 HSPA7P48741 367 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CACNG1Q06432 222 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 DENND5AQ6IQ26 1287 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 FAM131AQ6UXB0 335 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SPATA19Q7Z5L4 167 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 AMER2Q8N7J2 671 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 EIF1ADQ8N9N8 165 aaKnown RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ADAMTS15Q8TE58 950 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 XAGE5Q8WWM1 108 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 MCRS1Q96EZ8 462 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ART5Q96L15 291 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 OSBPL11Q9BXB4 747 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 SEMA3GQ9NS98 782 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 FBXW2Q9UKT8 454 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF541Q9H0D2 1346 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 C9IYK1 514 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 RPL17P18621 184 aaKnown RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CRHR1P34998 444 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ADRA1BP35368 520 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 AIF1P55008 147 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 GJA9P57773 515 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ANKRD22Q5VYY1 191 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 GALNT18Q6P9A2 607 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 MON1BQ7L1V2 547 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 ABCB9Q9NP78 766 aa12.03□□□□□ -0.48
COL8A1-201ENST00000261037 MED1Q15648 1581 aaPredicted RBP12.03□□□□□ -0.48
COL8A1-201ENST00000261037 CARNS1A5YM72 827 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 EDF1O60869 148 aaKnown RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 IGFALSP35858 605 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 LGALS3BPQ08380 585 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 NAE1Q13564 534 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.48
COL8A1-201ENST00000261037 DUSP28Q4G0W2 176 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 C6orf52Q5T4I8 152 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 STRADAQ7RTN6 431 aa12.02□□□□□ -0.48
COL8A1-201ENST00000261037 SFRP1Q8N474 314 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms