RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 CFAP46Q8IYW2 2715 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 GCN1Q92616 2671 aaKnown RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 PPP1R12AO14974 1030 aaPredicted RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 GRID2O43424 1007 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 MT-CYBP00156 380 aaPredicted RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 TPM1P09493 284 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 ACP5P13686 325 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 ZNF8P17098 575 aaPredicted RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 COMTP21964 271 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 NOP2P46087 812 aaKnown RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 DCDC1P59894 354 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 HHEXQ03014 270 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 CDK18Q07002 472 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 TBX2Q13207 712 aaPredicted RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 TEX44Q53QW1 395 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 MANEAQ5SRI9 462 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 ZNF648Q5T619 568 aaPredicted RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 TMEM164Q5U3C3 297 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 EXD3Q8N9H8 876 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 AGBL5Q8NDL9 886 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 SPATA22Q8NHS9 363 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 SLC38A3Q99624 504 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 GLOD4Q9HC38 313 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 ARFGAP3Q9NP61 516 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 OCIAD1Q9NX40 245 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 DDX56Q9NY93 547 aaKnown RBP16.7■□□□□ 0.26
CGREF1-201ENST00000260595 ZNF711Q9Y462 761 aa16.7■□□□□ 0.26
CGREF1-201ENST00000260595 PTPN3P26045 913 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 CDKN2BP42772 138 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 CLCNKAP51800 687 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 DYNLT1P63172 113 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 PRKD1Q15139 912 aaPredicted RBP16.69■□□□□ 0.26
CGREF1-201ENST00000260595 PCSK7Q16549 785 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 WDR74Q6RFH5 385 aaPredicted RBP16.69■□□□□ 0.26
CGREF1-201ENST00000260595 ADGRG6Q86SQ4 1221 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 TRAM1L1Q8N609 369 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 BMPERQ8N8U9 685 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 OR10G6Q8NH81 332 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 TEKT5Q96M29 485 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 SPATA16Q9BXB7 569 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 OR2AG1Q9H205 316 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 TSPY26PQ9H489 355 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 TRIM39Q9HCM9 518 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 SAE1Q9UBE0 346 aaPredicted RBP16.69■□□□□ 0.26
CGREF1-201ENST00000260595 PCDHB11Q9Y5F2 797 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 PCDHGA4Q9Y5G9 962 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 B3GALT1Q9Y5Z6 326 aa16.69■□□□□ 0.26
CGREF1-201ENST00000260595 B4E171 279 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 B8ZZF3 427 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 STMND1H3BQB6 276 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 AURKAO14965 403 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 CHUKO15111 745 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 SLC25A14O95258 325 aaPredicted RBP16.68■□□□□ 0.26
CGREF1-201ENST00000260595 NDST3O95803 873 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 F3P13726 295 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 TNNT1P13805 278 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 BPIP17213 487 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 CSTF2P33240 577 aaKnown RBP eCLIP16.68■□□□□ 0.26
CGREF1-201ENST00000260595 CD68P34810 354 aaPredicted RBP16.68■□□□□ 0.26
CGREF1-201ENST00000260595 TSPAN7P41732 249 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 ADCY2Q08462 1091 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 NFATC2Q13469 925 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 ZNF569Q5MCW4 686 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 PDPK2PQ6A1A2 396 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 ARHGAP22Q7Z5H3 698 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 SLC9B2Q86UD5 537 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 RNF214Q8ND24 703 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 ART4Q93070 314 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 NKD1Q969G9 470 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 GLYATL1Q969I3 302 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 AHCYL2Q96HN2 611 aaKnown RBP16.68■□□□□ 0.26
CGREF1-201ENST00000260595 ZSCAN5AQ9BUG6 496 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 DDA1Q9BW61 102 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 PRDM8Q9NQV8 689 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 RAD18Q9NS91 495 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 SLC23A2Q9UGH3 650 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 TMPRSS11EQ9UL52 423 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 SPO11Q9Y5K1 396 aa16.68■□□□□ 0.26
CGREF1-201ENST00000260595 A0A0A6YYK5 440 aaPredicted RBP16.67■□□□□ 0.26
CGREF1-201ENST00000260595 KIR2DS5A0A0G2JLQ3 304 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 A0A0G2JNG1 304 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 PRR19A6NJB7 356 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 GPR89AB7ZAQ6 455 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 AKR1B15C9JRZ8 316 aaPredicted RBP16.67■□□□□ 0.26
CGREF1-201ENST00000260595 KIR2DS3K7RE56 304 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 DUX1O43812 170 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 SNX2O60749 519 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 ZIC2O95409 532 aaPredicted RBP16.67■□□□□ 0.26
CGREF1-201ENST00000260595 ITGB2P05107 769 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 GPR89BP0CG08 455 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 PECAM1P16284 738 aaPredicted RBP16.67■□□□□ 0.26
CGREF1-201ENST00000260595 NR2C2P49116 596 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 EPHA4P54764 986 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 HADHBP55084 474 aaKnown RBP16.67■□□□□ 0.26
CGREF1-201ENST00000260595 UBE2IP63279 158 aaKnown RBP16.67■□□□□ 0.26
CGREF1-201ENST00000260595 WASHC5Q12768 1159 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 KIR2DS5Q14953 304 aa16.67■□□□□ 0.26
CGREF1-201ENST00000260595 CNGA4Q8IV77 575 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms