RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 RAP2CQ9Y3L5 183 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SPAG17Q6Q759 2223 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 TTC34A8MYJ7 566 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 VPS26AO75436 327 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CLDN11O75508 207 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 IL1BP01584 269 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ABCB1P08183 1280 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 HLA-FP30511 346 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MAT2AP31153 395 aaKnown RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PREPP48147 710 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MS4A2Q01362 244 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 RAD51Q06609 339 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 GK3PQ14409 553 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 GRM2Q14416 872 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 SLC5A9Q2M3M2 681 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PARP15Q460N3 678 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PREPLQ4J6C6 727 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ISCA2Q86U28 154 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 C2CD4AQ8NCU7 369 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 EID2BQ96D98 161 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MYO19Q96H55 970 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CCDC106Q9BWC9 280 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 STOML1Q9UBI4 398 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MTRRQ9UBK8 725 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 POMPQ9Y244 141 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PDCD11Q14690 1871 aaKnown RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 VWA8A3KMH1 1905 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 NPIPB15A6NHN6 443 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PSMD12O00232 456 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 GLUD1P00367 558 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CYBBP04839 570 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CST5P28325 142 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 HMOX2P30519 316 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PTGER1P34995 402 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ADRA1AP35348 466 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 GRIA3P42263 894 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MAGEA6P43360 314 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 NDST2P52849 883 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 SEC13P55735 322 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 IRF5Q13568 498 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 OTUD3Q5T2D3 398 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 RNF220Q5VTB9 566 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CXorf57Q6NSI4 855 aaKnown RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ARCQ7LC44 396 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 RD3Q7Z3Z2 195 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CLEC4FQ8N1N0 589 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 GPR156Q8NFN8 814 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 BRSK1Q8TDC3 778 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MRPL57Q9BQC6 102 aaKnown RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 EBPLQ9BY08 206 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ADGRE3Q9BY15 652 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 IGSF5Q9NSI5 407 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CLIC5Q9NZA1 410 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 DOCK8Q8NF50 2099 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 GPR179Q6PRD1 2367 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 E7ENX8 843 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 LEFTY2O00292 366 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MRASO14807 208 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 TIPRLO75663 272 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ATP5HO75947 161 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CA3P07451 260 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 SLC2A4P14672 509 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ANPEPP15144 967 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CKMT2P17540 419 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 HNF1BP35680 557 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CCNHP51946 323 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 AIF1P55008 147 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 CDH4P55283 916 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 FAM189BP81408 668 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MEF2AQ02078 507 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 STARD3Q14849 445 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 PHKG1Q16816 387 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ARSIQ5FYB1 569 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 LRRC66Q68CR7 880 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 KIAA0930Q6ICG6 404 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ANKRD26P1Q6NSI1 321 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 ZSWIM9Q86XI8 627 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 KYQ8NBH2 561 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 STYXQ8WUJ0 223 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 TWIST2Q8WVJ9 160 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 TOP1MTQ969P6 601 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 TSSK3Q96PN8 268 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 TSGA13Q96PP4 275 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
CKAP2-201ENST00000258607 AKTIPQ9H8T0 292 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 TREX1Q9NSU2 369 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 U3KQV3 271 aa9.03□□□□□ -0.96
CKAP2-201ENST00000258607 A0A0G2JN53 185 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PDLIM1O00151 329 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 ANGPT2O15123 496 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 GRM6O15303 877 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 HOXA2O43364 376 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 SYNCRIPO60506 623 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 LUC7L3O95232 432 aaKnown RBP9.02□□□□□ -0.97
CKAP2-201ENST00000258607 PRLP01236 227 aa9.02□□□□□ -0.97
CKAP2-201ENST00000258607 FGF1P05230 155 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms