RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TREHO43280 583 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GREM1O60565 184 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ABCB7O75027 752 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NDUFS3O75489 264 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ZBTB11O95625 1053 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 JUNP05412 331 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CDH1P12830 882 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 IMPDH1P20839 514 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TUBA1BP68363 451 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TAF1CQ15572 869 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RBBP7Q16576 425 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 IMPG1Q17R60 797 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ATP6AP1LQ52LC2 224 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TMEM207Q6UWW9 146 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TUBA1AQ71U36 451 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 STK40Q8N2I9 435 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 EFHBQ8N7U6 833 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 OR10T2Q8NGX3 314 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 IPCEF1Q8WWN9 437 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 LRTOMTQ8WZ04 291 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 C12orf43Q96C57 262 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 C19orf60Q96EN9 201 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PPP3R2Q96LZ3 170 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TEKT5Q96M29 485 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PAAF1Q9BRP4 392 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 C1QTNF3Q9BXJ4 246 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NOL11Q9H8H0 719 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CRNNQ9UBG3 495 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TCAF1Q9Y4C2 921 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 LAMA2P24043 3122 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 A0A0J9YYE9 177 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SUPT3HB4E1H0 165 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 KLK8O60259 260 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ERCC2P18074 760 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NFKBIAP25963 317 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PTX3P26022 381 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 EPHX2P34913 555 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SERPINH1P50454 418 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 KPNA1P52294 538 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GRSF1Q12849 480 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ATP1A4Q13733 1029 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 C6orf10Q5SRN2 563 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF470Q6ECI4 717 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CMC1Q7Z7K0 106 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RTN4RL1Q86UN2 441 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ZC3HC1Q86WB0 502 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CARM1Q86X55 608 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 P3H2Q8IVL5 708 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PHTF2Q8N3S3 785 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 FBXO39Q8N4B4 442 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ATP6V0D2Q8N8Y2 350 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SLC2A14Q8TDB8 520 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 KATNAL1Q9BW62 490 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 WDR55Q9H6Y2 383 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CHST12Q9NRB3 414 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NDFIP2Q9NV92 336 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CACNA2D2Q9NY47 1150 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TAS2R13Q9NYV9 303 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SELENONQ9NZV5 590 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NCDNQ9UBB6 729 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CD300AQ9UGN4 299 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RNF112Q9ULX5 631 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CHD7Q9P2D1 2997 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 DFFAO00273 331 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TRIM24O15164 1050 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 VILLO15195 856 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SORBS2O94875 1100 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 F11P03951 625 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RAP2AP10114 183 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 OGNP20774 298 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CASP2P42575 452 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NFKB2Q00653 900 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ITGADQ13349 1161 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GRM3Q14832 879 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ATP6AP1Q15904 470 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 IL23RQ5VWK5 629 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 EGFLAMQ63HQ2 1017 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 FAM117BQ6P1L5 589 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 KLHL35Q6PF15 583 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TMEM26Q6ZUK4 368 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 EEPD1Q7L9B9 569 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 FSTL5Q8N475 847 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CBR4Q8N4T8 237 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GLB1L3Q8NCI6 653 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 OR13J1Q8NGT2 312 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NDRG1Q92597 394 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NPAS2Q99743 824 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CIB1Q99828 191 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 C17orf80Q9BSJ5 609 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SYT17Q9BSW7 474 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RRAGCQ9HB90 399 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GLOD4Q9HC38 313 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MAN1C1Q9NR34 630 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ZMPSTE24O75844 475 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MYO1DO94832 1006 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MATN4O95460 622 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 LTFP02788 710 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ATXN1LP0C7T5 689 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NCAM1P13591 858 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms